IMGT Repertoire (IG and TR)


Gene table: Western lowland gorilla (Gorilla gorilla gorilla) IGHC

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT gene name IMGT allele name Fct Serological
markers
or Allotype		 Chromosomal
localization		 T Pr IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Isolate Clone names Exons Accession numbers Positions in the sequence Secondary accession numbers Isolate Clone names Accession numbers Positions in the sequence
IGHA1 IGHA1*03 P (1) 14 LT578329.1 CH1 IMGT000078 MAP 1360416..1360721
H+CH2 (8) IMGT000078 MAP 1360933..1361290
CH3 (including CHS) IMGT000078 MAP 1361513..1361904
M IMGT000078 MAP 1364685..1364896
IGHA1*04 F 14 KB3781 CM054596.1 CH1 IMGT000139 MAP 1167033..1167338 KB3781 CM054572.1 IMGT000140 MAP 1170604..1170909
H+CH2 (8) IMGT000139 MAP 1167550..1167909 KB3781 CM054572.1 IMGT000140 MAP 1171121..1171480
CH3 (including CHS) IMGT000139 MAP 1168132..1168523 KB3781 CM054572.1 IMGT000140 MAP 1171703..1172094
M IMGT000139 MAP 1171308..1171519 KB3781 CM054572.1 IMGT000140 MAP 1174879..1175090
IGHA2 IGHA2*02 F 14 KB3781 CM054596.1 CH1 IMGT000139 MAP 1296520..1296825
H+CH2 (8) IMGT000139 MAP 1297037..1297357
CH3 (including CHS) IMGT000139 MAP 1297580..1297971
M IMGT000139 MAP 1300949..1301160
IGHA2*03 F 14 KB3781 CM054572.1 CH1 IMGT000140 MAP 1300757..1301062
H+CH2 (8) IMGT000140 MAP 1301274..1301594
CH3 (including CHS) IMGT000140 MAP 1301817..1302208
M IMGT000140 MAP 1305186..1305397
IGHD IGHD*01 F 14 Kamilah CM017861.1 CH1 IMGT000074 MAP 1027972..1028271
H1 IMGT000074 MAP 1028735..1028836
H2 IMGT000074 MAP 1031699..1031770
CH2 IMGT000074 MAP 1032509..1032832
CH3 IMGT000074 MAP 1033043..1033366
CHS IMGT000074 MAP 1035305..1035330
M1 IMGT000074 MAP 1036131..1036288
M2 IMGT000074 MAP 1036573..1036578
IGHD*02 F 14 LT578329.1 CH1 IMGT000078 MAP 1167838..1168137
H1 IMGT000078 MAP 1168601..1168702
H2 IMGT000078 MAP 1171646..1171717
CH2 IMGT000078 MAP 1172456..1172779
CH3 IMGT000078 MAP 1172990..1173313
CHS IMGT000078 MAP 1175251..1175276
M1 IMGT000078 MAP 1176077..1176234
M2 IMGT000078 MAP 1176519..1176524
IGHD*03 F 14 KB3781 CM054596.1 CH1 IMGT000139 MAP 974437..974739
H1 IMGT000139 MAP 975203..975304
H2 IMGT000139 MAP 978247..978318
CH2 IMGT000139 MAP 979057..979380
CH3 IMGT000139 MAP 979591..979914
CHS IMGT000139 MAP 981853..981878
M1 IMGT000139 MAP 982679..982836
M2 IMGT000139 MAP 983121..983126
IGHD*04 F 14 KB3781 CM054572.1 CH1 IMGT000140 MAP 978739..979041
H1 IMGT000140 MAP 979505..979606
H2 IMGT000140 MAP 982556..982627
CH2 IMGT000140 MAP 983366..983689
CH3 IMGT000140 MAP 983900..984223
CHS IMGT000140 MAP 986168..986193
M1 IMGT000140 MAP 986994..987151
M2 IMGT000140 MAP 987436..987441
IGHE IGHE*02 F 14 KB3781 CM054596.1 CH1 IMGT000139 MAP 1284470..1284778 KB3781 CM054572.1 IMGT000140 MAP 1288732..1289040
CH2 IMGT000139 MAP 1284986..1285306 KB3781 CM054572.1 IMGT000140 MAP 1289248..1289568
CH3 IMGT000139 MAP 1285393..1285716 KB3781 CM054572.1 IMGT000140 MAP 1289655..1289978
CH4 (including CHS) IMGT000139 MAP 1285800..1286128 KB3781 CM054572.1 IMGT000140 MAP 1290062..1290390
M1 IMGT000139 MAP 1288216..1288337 KB3781 CM054572.1 IMGT000140 MAP 1292478..1292599
M2 IMGT000139 MAP 1288422..1288502 KB3781 CM054572.1 IMGT000140 MAP 1292684..1292764
IGHEP1 IGHEP1*01 P (2) 14 LT578329.1 CH2 IMGT000078 MAP 1347752..1348007
CH3 IMGT000078 MAP 1348094..1348417
CH4 (including CHS) IMGT000078 MAP 1348501..1348829
M1 IMGT000078 MAP 1350912..1351033
M2 IMGT000078 MAP 1351118..1351198
IGHEP1*02 P (2) 14 KB3781 CM054596.1 CH2 IMGT000139 MAP 1154021..1154276 KB3781 CM054572.1 IMGT000140 MAP 1157614..1157872
CH3 IMGT000139 MAP 1154363..1154686 KB3781 CM054572.1 IMGT000140 MAP 1157959..1158282
CH4 (including CHS) IMGT000139 MAP 1154770..1155098 KB3781 CM054572.1 IMGT000140 MAP 1158366..1158694
M1 IMGT000139 MAP 1157186..1157307 KB3781 CM054572.1 IMGT000140 MAP 1160782..1160903
M2 IMGT000139 MAP 1157392..1157472 KB3781 CM054572.1 IMGT000140 MAP 1160988..1161068
IGHG1 IGHG1*02 P (7) 14 Kamilah CM017861.1 CH1 IMGT000074 MAP 1129476..1129769
CH2 IMGT000074 MAP 1130465..1130794
CH3 (including CHS) IMGT000074 MAP 1130892..1131211
M1 IMGT000074 MAP 1132508..1132638
M2 IMGT000074 MAP 1134554..1134634
IGHG1*03 F 14 LT578329.1 CH1 IMGT000078 MAP 1326744..1327037 KB3781 CM054596.1 IMGT000139 MAP 1132923..1133216
H IMGT000078 MAP 1327429..1327473 KB3781 CM054596.1 IMGT000139 MAP 1133608..1133652
CH2 IMGT000078 MAP 1327592..1327921 KB3781 CM054596.1 IMGT000139 MAP 1133771..1134100
CH3 (including CHS) IMGT000078 MAP 1328019..1328338 KB3781 CM054596.1 IMGT000139 MAP 1134198..1134517
M1 IMGT000078 MAP 1329633..1329763 KB3781 CM054596.1 IMGT000139 MAP 1135812..1135942
M2 IMGT000078 MAP 1331901..1331981 KB3781 CM054596.1 IMGT000139 MAP 1138080..1138160
CH1 IMGT000078 MAP 1326744..1327037 KB3781 CM054572.1 IMGT000140 MAP 1136519..1136812
H IMGT000078 MAP 1327429..1327473 KB3781 CM054572.1 IMGT000140 MAP 1137204..1137248
CH2 IMGT000078 MAP 1327592..1327921 KB3781 CM054572.1 IMGT000140 MAP 1137367..1137696
CH3 (including CHS) IMGT000078 MAP 1328019..1328338 KB3781 CM054572.1 IMGT000140 MAP 1137794..1138113
M1 IMGT000078 MAP 1329633..1329763 KB3781 CM054572.1 IMGT000140 MAP 1139408..1139538
M2 IMGT000078 MAP 1331901..1331981 KB3781 CM054572.1 IMGT000140 MAP 1141676..1141756
IGHG2 IGHG2*02 F 14 KB3781 CM054596.1 CH1 IMGT000139 MAP 1239542..1239835
H IMGT000139 MAP 1240228..1240263
CH2 IMGT000139 MAP 1240382..1240708
CH3 (including CHS) IMGT000139 MAP 1240806..1241125
M1 IMGT000139 MAP 1242422..1242552
M2 IMGT000139 MAP 1243164..1243244
IGHG2*03 F 14 KB3781 CM054572.1 CH1 IMGT000140 MAP 1243905..1244198
H IMGT000140 MAP 1244591..1244626
CH2 IMGT000140 MAP 1244745..1245071
CH3 (including CHS) IMGT000140 MAP 1245169..1245488
M1 IMGT000140 MAP 1246785..1246915
M2 IMGT000140 MAP 1247523..1247603
IGHG3A IGHG3A*01 P (3) 14 Kamilah CM017861.1 CH1 IMGT000074 MAP 1101604..1101897
H1 IMGT000074 MAP 1102288..1102338
H2 IMGT000074 MAP 1102482..1102526
CH2 IMGT000074 MAP 1102645..1102974
CH3 (including CHS) IMGT000074 MAP 1103072..1103391
M1 IMGT000074 MAP 1104690..1104820
M2 IMGT000074 MAP 1107327..1107405
IGHG3A*02 P (4) 14 LT578329.1 CH1 IMGT000078 MAP 1242883..1243098
H1 IMGT000078 MAP 1243492..1243542
H2 IMGT000078 MAP 1243686..1243730
H3 IMGT000078 MAP 1243872..1243916
H4 IMGT000078 MAP 1244060..1244104
H5 IMGT000078 MAP 1244248..1244292
CH2 IMGT000078 MAP 1244411..1244740
CH3 (including CHS) IMGT000078 MAP 1244838..1245157
M1 IMGT000078 MAP 1246457..1246587
M2 IMGT000078 MAP 1248481..1248559
IGHG3A*03 P (3) 14 KB3781 CM054596.1 CH1 IMGT000139 MAP 1048176..1048469
H1 IMGT000139 MAP 1048860..1048910
H2 IMGT000139 MAP 1049054..1049098
H3 IMGT000139 MAP 1049242..1049286
H4 IMGT000139 MAP 1049430..1049474
H5 IMGT000139 MAP 1049618..1049662
CH2 IMGT000139 MAP 1049781..1050110
CH3 (including CHS) IMGT000139 MAP 1050208..1050527
M1 IMGT000139 MAP 1051826..1051956
M2 IMGT000139 MAP 1054518..1054596
IGHG3A*04 P (3) 14 KB3781 CM054572.1 CH1 IMGT000140 MAP 1052473..1052766
H1 IMGT000140 MAP 1053157..1053207
H2 IMGT000140 MAP 1053351..1053395
H3 IMGT000140 MAP 1053539..1053583
H4 IMGT000140 MAP 1053727..1053771
H5 IMGT000140 MAP 1053915..1053959
CH2 IMGT000140 MAP 1054078..1054407
CH3 (including CHS) IMGT000140 MAP 1054505..1054824
M1 IMGT000140 MAP 1056123..1056253
M2 IMGT000140 MAP 1058116..1058194
IGHG3B IGHG3B*01 P (5) 14 LT578329.1 CH1 IMGT000078 MAP 1271176..1271469
H1 IMGT000078 MAP 1271862..1271912
H2 IMGT000078 MAP 1272056..1272100
CH2 IMGT000078 MAP 1272219..1272547
CH3 (including CHS) IMGT000078 MAP 1272645..1272964
M1 IMGT000078 MAP 1274256..1274386
M2 IMGT000078 MAP 1276590..1276670
IGHG3B*02 F 14 KB3781 CM054596.1 CH1 IMGT000139 MAP 1077256..1077549
H1 IMGT000139 MAP 1077942..1077992
H2 IMGT000139 MAP 1078136..1078180
CH2 IMGT000139 MAP 1078299..1078628
CH3 (including CHS) IMGT000139 MAP 1078726..1079045
M1 IMGT000139 MAP 1080340..1080470
M2 IMGT000139 MAP 1082675..1082755
IGHG3B*03 F 14 KB3781 CM054572.1 CH1 IMGT000140 MAP 1080853..1081146
H1 IMGT000140 MAP 1081539..1081589
H2 IMGT000140 MAP 1081733..1081777
CH2 IMGT000140 MAP 1081896..1082225
CH3 (including CHS) IMGT000140 MAP 1082323..1082642
M1 IMGT000140 MAP 1083937..1084067
M2 IMGT000140 MAP 1086272..1086352
IGHG3C IGHG3C*01 P (6) 14 LT578329.1 CH1 IMGT000078 MAP 1298252..1298544
H1 IMGT000078 MAP 1298937..1298987
H2 IMGT000078 MAP 1299131..1299175
H3 IMGT000078 MAP 1299319..1299363
H4 IMGT000078 MAP 1299507..1299551
CH2 IMGT000078 MAP 1299670..1299999
CH3 (including CHS) IMGT000078 MAP 1300097..1300415
M1 IMGT000078 MAP 1301707..1301837
M2 IMGT000078 MAP 1303286..1303366
IGHG3C*02 F 14 KB3781 CM054596.1 CH1 IMGT000139 MAP 1104414..1104707 KB3781 CM054572.1 IMGT000140 MAP 1108011..1108304
H1 IMGT000139 MAP 1105100..1105150 KB3781 CM054572.1 IMGT000140 MAP 1108697..1108747
H2 IMGT000139 MAP 1105294..1105338 KB3781 CM054572.1 IMGT000140 MAP 1108891..1108935
H3 IMGT000139 MAP 1105482..1105526 KB3781 CM054572.1 IMGT000140 MAP 1109079..1109123
H4 IMGT000139 MAP 1105670..1105714 KB3781 CM054572.1 IMGT000140 MAP 1109267..1109311
CH2 IMGT000139 MAP 1105833..1106162 KB3781 CM054572.1 IMGT000140 MAP 1109430..1109759
CH3 (including CHS) IMGT000139 MAP 1106260..1106579 KB3781 CM054572.1 IMGT000140 MAP 1109857..1110176
M1 IMGT000139 MAP 1107874..1108004 KB3781 CM054572.1 IMGT000140 MAP 1111471..1111601
M2 IMGT000139 MAP 1109445..1109525 KB3781 CM054572.1 IMGT000140 MAP 1113042..1113122
IGHG4 IGHG4*02 F 14 KB3781 CM054596.1 CH1 IMGT000139 MAP 1258340..1258633 KB3781 CM054572.1 IMGT000140 MAP 1262576..1262869
H IMGT000139 MAP 1259026..1259061 KB3781 CM054572.1 IMGT000140 MAP 1263262..1263297
CH2 IMGT000139 MAP 1259180..1259509 KB3781 CM054572.1 IMGT000140 MAP 1263416..1263745
CH3 (including CHS) IMGT000139 MAP 1259607..1259926 KB3781 CM054572.1 IMGT000140 MAP 1263843..126416
M1 IMGT000139 MAP 1261214..1261344 KB3781 CM054572.1 IMGT000140 MAP 1265450..1265580
M2 IMGT000139 MAP 1262302..1262382 KB3781 CM054572.1 IMGT000140 MAP 1266538..1266618
IGHGP IGHGP*02 P (6) 14 LT578329.1 CH1 IMGT000078 MAP 1405491..1405783
H IMGT000078 MAP 1406173..1406223
CH2 IMGT000078 MAP 1406339..1406668
CH3 (including CHS) IMGT000078 MAP 1406770..1407080
M1 IMGT000078 MAP 1408373..1408503
M2 IMGT000078 MAP 1411867..1411946
IGHGP*03 F 14 KB3781 CM054596.1 CH1 IMGT000139 MAP 1211747..1212040
H IMGT000139 MAP 1212430..1212480
CH2 IMGT000139 MAP 1212599..1212928
CH3 (including CHS) IMGT000139 MAP 1213026..1213345
M1 IMGT000139 MAP 1214642..1214772
M2 IMGT000139 MAP 1218149..1218229
IGHGP*04 F 14 KB3781 CM054572.1 M2 IMGT000140 MAP 1215821..1216114
H IMGT000140 MAP 1216504..1216554
CH2 IMGT000140 MAP 1216673..1217002
CH3 (including CHS) IMGT000140 MAP 1217100..1217419
M1 IMGT000140 MAP 1218716..1218846
M2 IMGT000140 MAP 1222255..1222335
IGHM IGHM*01 F 14 Kamilah CM017861.1 CH1 IMGT000074 MAP 1017762..1018073 LT578329.1 IMGT000078 MAP 1157631..1157942
CH2 IMGT000074 MAP 1018164..1018499 LT578329.1 IMGT000078 MAP 1158033..1158368
CH3 IMGT000074 MAP 1018745..1019062 LT578329.1 IMGT000078 MAP 1158614..1158931
CH4 (including CHS) IMGT000074 MAP 1019242..1019633 LT578329.1 IMGT000078 MAP 1159111..1159502
M1 IMGT000074 MAP 1021723..1021838 LT578329.1 IMGT000078 MAP 1161591..1161706
M2 IMGT000074 MAP 1022012..1022017 LT578329.1 IMGT000078 MAP 1161880..1161885
CH1 IMGT000074 MAP 1017762..1018073 KB3781 CM054596.1 IMGT000139 MAP 964229..964540
CH2 IMGT000074 MAP 1018164..1018499 KB3781 CM054596.1 IMGT000139 MAP 964631..964966
CH3 IMGT000074 MAP 1018745..1019062 KB3781 CM054596.1 IMGT000139 MAP 965212..965529
CH4 (including CHS) IMGT000074 MAP 1019242..1019633 KB3781 CM054596.1 IMGT000139 MAP 965709..966100
M1 IMGT000074 MAP 1021723..1021838 KB3781 CM054596.1 IMGT000139 MAP 968190..968305
M2 IMGT000074 MAP 1022012..1022017 KB3781 CM054596.1 IMGT000139 MAP 968479..968484
CH1 IMGT000074 MAP 1017762..1018073 KB3781 CM054572.1 IMGT000140 MAP 968532..968843
CH2 IMGT000074 MAP 1018164..1018499 KB3781 CM054572.1 IMGT000140 MAP 968934..969269
CH3 IMGT000074 MAP 1018745..1019062 KB3781 CM054572.1 IMGT000140 MAP 969515..969832
CH4 (including CHS) IMGT000074 MAP 1019242..1019633 KB3781 CM054572.1 IMGT000140 MAP 970012..970403
M1 IMGT000074 MAP 1021723..1021838 KB3781 CM054572.1 IMGT000140 MAP 972493..972608
M2 IMGT000074 MAP 1022012..1022017 KB3781 CM054572.1 IMGT000140 MAP 972782..972787

(s): trancript of a secreted chain.
(m): trancript of a membrane chain.

IMGT notes:
  1. (1) frameshift in H
  2. (2) no CH1
  3. (3) frameshift in M2
  4. (4) incomplete CH1 in 5' due to a gap, frameshift in M2
  5. (5) frameshift in CH2
  6. (6) frameshift in CH1
  7. (7) no H
  8. (8) In the IGHA gene, the hinge (H) and CH2 are joined in a single exon
Created:
03/12/2021
Last updated:
22/09/2023
Authors:
Chahrazed Debbagh