Here you are: IMGT Web resources > IMGT Repertoire (IG and TR) > 1. Locus and genes

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT subgroup IMGT gene name IMGT allele name Fct Chromosomal
localization
R T Pr IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Isolate Clone names Accession numbers Positions in the sequence
(D-GENE-UNIT)
Secondary accession numbers Isolate Clone names Accession numbers Positions in the sequence
(D-GENE-UNIT)
IGHD1 IGHD1-1 IGHD1-1*01 F 14 Kamilah CM017861.1 IMGT000074 MAP 944758..944830 LT578329.1 IMGT000078 1084303..1084375
IGHD1-5-2 IGHD1-5-2*01 ORF (4) 14 LT578329.1 IMGT000078 MAP 1094081..1094153
IGHD1-7 IGHD1-7*01 F 14 LT578329.1 IMGT000078 MAP 1103470..1103541
IGHD1-14 IGHD1-14*01 ORF (9) 14 LT578329.1 IMGT000078 MAP 1112909..1112980
IGHD1-20 IGHD1-20*01 F 14 Kamilah CM017861.1 IMGT000074 MAP 982544..982616 LT578329.1 IMGT000078 1122448..1122520
IGHD1-26 IGHD1-26*01 ORF (8) 14 Kamilah CM017861.1 IMGT000074 MAP 992752..992826 LT578329.1 IMGT000078 1132598..1132672
IGHD2 IGHD2-2 IGHD2-2*01 F 14 Kamilah CM017861.1 IMGT000074 MAP 947429..947515 LT578329.1 IMGT000078 1086972..1087058
IGHD2-5-3 IGHD2-5-3*01 F 14 LT578329.1 IMGT000078 MAP 1096756..1096842
IGHD2-8 IGHD2-8*01 F 14 LT578329.1 IMGT000078 MAP 1106393..1106479
IGHD2-15 IGHD2-15*01 F 14 Kamilah CM017861.1 IMGT000074 MAP 975767..975853 LT578329.1 IMGT000078 1115600..1115686
IGHD2-21 IGHD2-21*01 F 14 Kamilah CM017861.1 IMGT000074 MAP 985267..985350 LT578329.1 IMGT000078 1125160..1125243
IGHD3 IGHD3-3 IGHD3-3*01 F 14 Kamilah CM017861.1 IMGT000074 MAP 949888..949974 LT578329.1 IMGT000078 1089428..1089514
IGHD3-5-4 IGHD3-5-4*01 F 14 LT578329.1 IMGT000078 MAP 1099030..1099116
IGHD3-9 IGHD3-10*01 F 14 LT578329.1 IMGT000078 MAP 1108806..1108892
IGHD3-16 IGHD3-16*01 F 14 Kamilah CM017861.1 IMGT000074 MAP 978053..978144
IGHD3-16*02 ORF (10) 14 LT578329.1 IMGT000078 MAP 1117967..1118059
IGHD3-22 IGHD3-22*01 F 14 Kamilah CM017861.1 IMGT000074 MAP 987691..987777
IGHD3-22*02 F 14 LT578329.1 IMGT000078 MAP 1127562..1127648
IGHD4 IGHD4-4 IGHD4-4*01 ORF (1) 14 Kamilah CM017861.1 IMGT000074 MAP 951036..951107 LT578329.1 IMGT000078 1090576..1090647
IGHD4-5-5 IGHD4-5-5*01 ORF (5) 14 LT578329.1 IMGT000078 MAP 1100166..1100237
IGHD4-11 IGHD4-11*01 ORF (6) 14 LT578329.1 IMGT000078 MAP 1109937..1110008
IGHD4-17 IGHD4-17*01 F 14 Kamilah CM017861.1 IMGT000074 MAP 979200..979271 LT578329.1 IMGT000078 1119109..1119180
IGHD4-23 IGHD4-23*01 ORF (6) 14 Kamilah CM017861.1 IMGT000074 MAP 988878..988952
IGHD4-23*02 ORF (6) 14 LT578329.1 IMGT000078 MAP 1128738..1128812
IGHD5 IGHD5-5 IGHD5-5*01 ORF (2) 14 Kamilah CM017861.1 IMGT000074 MAP 952000..952078 LT578329.1 IMGT000078 1091540..1091618
IGHD5-5-6 IGHD5-5-6*01 F 14 LT578329.1 IMGT000078 MAP 1101118..1101195
IGHD5-12 IGHD5-12*01 F 14 LT578329.1 IMGT000078 MAP 1110893..1110971
IGHD5-18 IGHD5-18*01 F 14 Kamilah CM017861.1 IMGT000074 MAP 980166..980241
IGHD5-18*02 F 14 LT578329.1 IMGT000078 MAP 1120073..1120151
IGHD5-24 IGHD5-24*01 ORF (7) 14 Kamilah CM017861.1 IMGT000074 MAP 989845..989920 LT578329.1 IMGT000078 1129704..1129779
IGHD6 IGHD6-5-1 IGHD6-5-1*01 P (3) 14 LT578329.1 IMGT000078 MAP 1093936..1093954 (11)
IGHD6-6 IGHD6-6*01 F 14 LT578329.1 IMGT000078 MAP 1102966..1103039
IGHD6-13 IGHD6-13*01 F 14 LT578329.1 IMGT000078 MAP 1112403..1112479
IGHD6-19 IGHD6-19*01 F 14 Kamilah CM017861.1 IMGT000074 MAP 982029..982105 LT578329.1 IMGT000078 1121940..1122016
IGHD6-25 IGHD6-25*01 F 14 Kamilah CM017861.1 IMGT000074 MAP 992210..992283 LT578329.1 IMGT000078 1132064..1132137
IGHD7 IGHD7-27 IGHD7-27*01 F 14 Kamilah CM017861.1 IMGT000074 MAP 1008654..1008664 LT578329.1 IMGT000078 1148310..1148376
MAP: mapped sequences.

IMGT notes:
  1. (1) noncanonical 3'D-NONAMER: gcagaaact instead of acaaaaacc
  2. (2) noncanonical 5'D-NONAMER: ggttatcat instead of ggtttttgt
  3. (3) no 3'D-RS
  4. (4) noncanonical 3'D-HEPTAMER: ctccatg instead of cacagtg
  5. (5) noncanonical 5'D-HEPTAMER: ctatgtg instead of cactgtg, noncanonical 5'D-NONAMER: tttttgtga instead of ggtttctga
  6. (6) noncanonical 5'D-HEPTAMER: tgctgtg instead of cactgtg
  7. (7) noncanonical 5'D-HEPTAMER: ggccgtg instead of cactgtg
  8. (8) noncanonical 5'D-HEPTAMER: catggtg instead of cactgtg
  9. (9) noncanonical 3'D-HEPTAMER: ccactgt instead of cacagtg, noncanonical 3'D-NONAMER: gtcaaaaac instead of acaaaaacc
  10. (10) noncanonical 3'D-HEPTAMER: cacagca instead of cacagtg
  11. (11) position of D-REGION
Created:
03/12/2021
Last updated:
21/03/2022
Authors:
Chahrazed Debbagh