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"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT gene name IMGT allele name Fct Chromosomal
localization
R T Pr IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Isolate Clone names Accession numbers Positions in the sequence
(J-GENE-UNIT)
Secondary accession numbers Isolate Clone names Accession numbers Positions in the sequence
(J-GENE-UNIT)
TRGJP1 TRGJP1*01 ORF (1) 7 Kamilah CM017854.1 IMGT000102 MAP 98701..98788 LT578344.1 IMGT000103 103771..103858
TRGJP TRGJP*01 ORF (2) 7 Kamilah CM017854.1 IMGT000102 MAP 101373..101462 LT578344.1 IMGT000103 106457..106546
TRGJ1 TRGJ1*01 F 7 Kamilah CM017854.1 IMGT000102 MAP 105502..105578 LT578344.1 IMGT000103 110579..110656
TRGJP2 TRGJP2*01 ORF (1) 7 Kamilah CM017854.1 IMGT000102 MAP 118663..118750 LT578344.1 IMGT000103 123742..123828
TRGJ2 TRGJ2*01 F 7 Kamilah CM017854.1 IMGT000102 MAP 121627..121704 LT578344.1 IMGT000103 126706..126783
MAP: mapped sequences.

IMGT notes:
  1. (1) noncanonical J-MOTIF: FAXG instead of FGXG
  2. (2) noncanonical J-HEPTAMER: caggtgg instead of cactgtg+noncanonical J-NONAMER: gagattctt instead of agttttga
Created:
26/04/2022
Last updated:
22/07/2022
Authors:
Joanna Maria Rosinska, Chahrazed Debbagh