Here you are: IMGT Web resources > IMGT Repertoire (IG and TR) > 1. Locus and genes

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT gene name IMGT allele name Fct Chromosomal
localization		 R T Pr IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Breed Clone names Accession numbers Positions in the sequence
(J-GENE-UNIT)		 Secondary accession numbers Breed Clone names Accession numbers Positions in the sequence
(J-GENE-UNIT)
TRDJ1 TRDJ1*01 F 8 Boxer CM000008.3 IMGT000004 [1] 639529..639607
TRDJ2 TRDJ2*01 F 8 Boxer CM000008.3 IMGT000004 [1] 645651..645726
TRDJ3 TRDJ3*01 ORF (1) 8 Boxer CM000008.3 IMGT000004 [1] 647747..647846
TRDJ4 TRDJ4*01 F 8 Boxer CM000008.3 IMGT000004 [1] 649856..649942
IMGT notes:
  1. (1) Non conserved consensus sequence, FGXG is replaced by FGXL
IMGT references:
  1. [1] Martin J. et al. Immunogenetics 2018 Apr;70(4):223-236 (2018) Sep 19. doi: 10.1007/s00251-017-1028-0. Epub 2017 Sep 19. PMID:28924718
Created:
07/06/2017
Last updated:
22/09/2023
Authors:
Saida Hadi-Saljoqi