IMGT Repertoire (IG and TR)

Gene table: bottlenose dolphin (Tursiops truncatus) TRGC

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT gene name IMGT allele name Fct Chromosomal
T Pr IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Breed Clone names Exons Accession numbers Positions in the sequence Secondary accession numbers Breed Clone names Accession numbers Positions in the sequence
TRGC TRGC*01 F (1) + EX1 JH473572 [1] 37557..37886 IMGT000015 40157..40486
EX2 JH473572 [1] 41748..41783 IMGT000015 44347..44382
EX3 JH473572 [1] 43319..43458 IMGT000015 45919..46058
IMGT notes:
  1. (1) noncanonical DONOR-SPLICE: nat instead of ngt, however this C-GENE has been found spliced to a J-REGION in cDNA
IMGT references:
  1. [1] Linguiti, G. et al., BMC Genomics, 17, 634 (2016). PMID:27528257
Last updated:
Perrine Pégorier