IMGT Repertoire (IG and TR)

Fct: FUNCTIONALITY
- F: Functional
- P: Pseudogene
- ORF: Open Reading Frame
T: Transcribed
Pr: Translated into protein

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

Click on:

IMGT gene name to get the corresponding IMGT/GENE-DB entry,
IMGT allele name to see the corresponding Alignments of alleles,
accession number to get the corresponding IMGT/LIGM-DB entry.

IMGT gene name	IMGT allele name	Fct	Chromosomal localization	T	Pr	IMGT/LIGM-DB locus reference sequences						IMGT/LIGM-DB sequences from the literature
IMGT gene name	IMGT allele name	Fct	Chromosomal localization	T	Pr	Breed	Clone names	Exons	Accession numbers	Positions in the sequence	Secondary accession numbers	Breed		Clone names	Accession numbers	Positions in the sequence
	TRBC1	TRBC1*01	F						Sable		EX1	IMGT000023	[1]	206503..206892
											EX2	IMGT000023	[1]	207430..207447
											EX3	IMGT000023	[1]	207597..207703
											EX4	IMGT000023	[1]	208019..208036
	TRBC2	TRBC2*01	F						Sable		EX1	IMGT000023	[1]	215548..215937
											EX2	IMGT000023	[1]	216475..216492
											EX3	IMGT000023	[1]	216642..216748
											EX4	IMGT000023	[1]	217021..217038

IMGT references:

[1] Gerritsen B et al., PhD thesis chapter, Utrecht University (2018).

More information:

See also (IMGT Scientific chart):

Created:: 21/09/2018
Last updated:: 22/09/2023
Authors:: Perrine Pégorier

IMGT Repertoire (IG and TR)

Gene table: domestic ferret (Mustela putorius furo) TRBC