Here you are: IMGT Web resources > IMGT Repertoire (IG and TR) > 1. Locus and genes
Citing this page:Ruiz, M., Pallarès N., Contet V., Barbié V. and Lefranc M-P. Exp. Clin. Immunogenet. 16, 173-184 (1999) doi: 10.1159/000019109 PMID: 10394055 pdf

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

Click on:

Haplotypes have been described in Mattila, P.S et al., Eur. J. Immunol., 25, 2578-2582 (1995).

IMGT gene name IMGT allele name Fct Chromosomal localization R T Pr Positions in the locus IMGT/LIGM-DB reference sequences IMGT/LIGM-DB sequences from the literature
Clone names Accession numbers Positions in the sequence
(J-GENE-UNIT)
Secondary accession numbers Clone names Accession numbers Positions in the sequence
(J-GENE-UNIT)
IGHJ1 IGHJ1*01 F 14q32.33 J1 J00256 [1] (1) 686-774 X86355 [3] (2) 247-336
X86356 [3] (2)
X86357 [3] (2)
X86358 [3] (2)
X86359 [3] (2)
X97051 [4]
IGHJ1P IGHJ1P*01 P 14q32.33 J1P J00256 [1] (1) 467-557 X86355 [3] (2) 30-120
X86356 [3] (2)
X86357 [3] (2)
X86358 [3] (2)
X86359 [3] (2)
X97051 [4]
IGHJ1P*02 P 14q32.33 CM000676.2 IMGT000035 (1)(6) 1014131-1014221
IGHJ2 IGHJ2*01 F 14q32.33 J2 J00256 [1] (1) 893-984 X86355 [3] (2) 454-544
X86356 [3] (2)
X86357 [3] (2)
X86358 [3] (2)
X86359 [3] (2)
X97051 [4]
IGHJ2P IGHJ2P*01 P 14q32.33 J2P J00256 [1] (1) 1284-1380 X86355 [3] (2) 853-952
X86356 [3] (2)
X86357 [3] (2)
X86358 [3] (2)
X86359 [3] (2)
X97051 [4]
IGHJ2P*02 P 14q32.33 CM000676.2 IMGT000035 (1)(6) 1014955-1015054
IGHJ3 IGHJ3*01 F 14q32.33 J3 J00256 [1] (1) 1537-1586 M25625 [2] 31-119
IGHJ3*02 F 14q32.33 J3 X86355 [3] (2) 1068-1156 X97051 [4]
X86356 [3] (2)
X86357 [3] (2)
X86358 [3] (2)
X86359 [3] (2)
IGHJ4 IGHJ4*01 F 14q32.33 J4 J00256 [1] (1) 1873-1959
IGHJ4*02 F 14q32.33 J4 X86355 [3] (2) 1441-1527 X97051 [4]
X86356 [3] (2)
X86357 [3] (2)
X86358 [3] (2)
X86359 [3] (2)
IGHJ4*03 F 14q32.33 J4 M25625 [2] (5) 407-493
IGHJ5 IGHJ5*01 F 14q32.33 J5 J00256 [1] (1) 2317-2404 M25625 [2]
IGHJ5*02 F 14q32.33 J5 X86355 [3] (2) 1840-1928 X97051 [3]
X86356 [3] (2)
X86357 [3] (2)
X86358 [3] (2)
X86359 [3] (2)
IGHJ3P IGHJ3P*01 P 14q32.33 J3P J00256 [1] (1) 2709-2797 M25625 [2]
IGHJ3P*02 P 14q32.33 J3P X86355 [3] (2) 2239-2326 X97051 [3] (2)
X86356 [3] (2)
X86357 [3] (2)
X86358 [3] (2)
X86359 [3] (2)
IGHJ6 IGHJ6*01 F 14q32.33 J6 J00256 [1] (1) 2909-3009
IGHJ6*02 F 14q32.33 J6 X86355 [3] (3) 2444-2543 X86357 [3] (3)
X86358 [3] (3)
X97051 [4]
M63031 [5]
M25625 [2] (5) 1442-1542
IGHJ6*03 F 14q32.33 J6 M63030 [5] (7) 20-120 X86359 [3] (4)
X86356 [3] (4)
CM000676.2 IMGT000035 1016547-1016647 (7)
IGHJ6*04 F 14q32.33 J6 AJ879487 [6] 1-101
IMGT notes:
  1. (1) Sequenced in haplotype a.
  2. (2) Sequenced in haplotypes b1, b1c, b2, b3 and c, respectively.
  3. (3) Sequenced in haplotypes b1, b2 and b3, respectively.
  4. (4) Sequenced in haplotypes b1c and c, respectively.
  5. (5) Sequenced in haplotype d.
  6. (6) No DONOR-SPLICE: ncc instead of ngt.
  7. (7) Has a complete J-REGION.
IMGT references:
  1. [1] Ravetch J.V. et al., Cell, 27, 583-591 (1981). PMID:6101209
  2. [2] Rabbitts T.H., Biochem. Soc. Trans., 11, 119-126 (1983). PMID:6420211
  3. [3] Mattila P.S. et al., Eur. J. Immunol., 25, 2578-2582 (1995). PMID:7589129
  4. [4] Corbett S. et al., J. Mol. Biol. 270, 587-597 (1997). PMID:9245589
  5. [5] Nottenbourg C. and Hasenstab, D., Unpublished.
  6. [6] Ohm-Laursen L. et al., Immunogenetics, 57, 621-627 (2005). PMID:16133446
Created:
18/04/1997
Last updated:
04/02/2022
Authors:
Nathalie Pallarès, Joumana Jabado Michaloud