IMGT Repertoire (IG and TR)

Fct: FUNCTIONALITY
- F: Functional
- P: Pseudogene
- ORF: Open Reading Frame
T: Transcribed
Pr: Translated into protein

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

Click on:

IMGT gene name to get the corresponding IMGT/GENE-DB entry,
IMGT allele name to see the corresponding Alignments of alleles,
accession number to get the corresponding IMGT/LIGM-DB entry.

IMGT gene name	IMGT allele name	Fct	T	Pr	Positions in the locus	IMGT/LIGM-DB reference sequences						IMGT/LIGM-DB sequences from the literature
IMGT gene name	IMGT allele name	Fct	T	Pr	Positions in the locus	Strain	Clone names	Exons	Accession numbers	Positions in the sequence	Secondary accession numbers	Strain			Clone names	Accession numbers	Positions in the sequence
	IGHG2C	IGHG2C*01	(F)			+			LOU	IgG	CH1	X07189	[1]	c (s)	1-291
											H	X07189	[1]	c (s)	292-336
											CH2	X07189	[1]	c (s)	337-666
											CH3(including CHS)	X07189	[1]	c (s)	667-987
											M1
											M2

c: cDNA sequence.
(s): transcript of a secreted chain.

IMGT references:

[1] Brueggemann M. et al., Eur. J. Immunol., 18, 317-319 (1988). PMID:3127222

See also (IMGT Scientific chart):

Created:: 30/07/2008
Last updated:: 22/09/2023
Authors:: Fatena Bellahcene

IMGT Repertoire (IG and TR)

Gene table: black rat (Rattus rattus) IGHC