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Correspondence between IMGT gene names and clone names is available in Gene tables: Bos taurus (cattle) and Homo sapiens (human)

Bos taurus (cattle) IMGT IGHV subgroups (1) Related Homo sapiens (human) IGHV subgroups
IGHV1 (12 F, several P) IGHV2, IGHV4, IGHV3
IGHV2 (all P) IGHV4
IGHV3 (all P) IGHV1

IMGT/V-QUEST analysis of the V-REGION of the twelve functional Bos taurus IGHV1 genes against Homo sapiens IGHV subgroups
Bos taurus IGHV V-REGION were obtained from KT723008 (IMGT/LIGM-DB).
IMGT/V-QUEST analysis was performed in the following conditions:
IMGT/V-QUEST program version: 3.4.8 (11 July 2017) - IMGT/V-QUEST reference directory release: 201728-2 (11 July 2017).
Species: Homo sapiens (human).
Receptor type or locus: IGH.
Nb of aligned reference sequences : 15.
Advanced parameters : With allele *01 only.

Closest V-REGIONs (evaluated from the V-REGION first nucleotide to the 2nd-CYS codon)
For each Bos taurus IGHV1 functional gene, are reported the score, the percent of identity and the ratio of the number of identical nucleotides (nt) on the aligned V-REGION length for the first Homo sapiens IGHV2, IGHV3 and IGHV4 gene in the IMGT/V-QUEST results.

Bos taurus functional IGHV1 genes Homo sapiens IGHV subgroups
IGHV2
Score, Identity (Ratio)
IGHV3
Score, Identity (Ratio)
IGHV4
Score, Identity (Ratio)
IGHV1-39 628, 69.12% (197/285 nt) 637, 69.47% (198/285 nt) 628, 69.12% (197/285 nt)
IGHV1-37 583, 67.37% (192/285 nt) 565, 66.67% (190/285 nt) 592, 67.72% (193/285 nt)
IGHV1-33 601, 68.07% (194/285 nt) 646, 69.82% (199/285 nt) 664, 70.53% (201/285 nt)
IGHV1-30 628, 69.12% (197/285 nt) 619, 68.77% (196/285 nt) 664, 70.53% (201/285 nt)
IGHV1-27 700, 71.93% (205/285 nt) 619, 68.77% (196/285 nt) 691, 71.58% (204/285 nt)
IGHV1-25 592, 67.72% (193/285 nt) 601, 68.07% (194/285 nt) 601, 68.07% (194/285 nt)
IGHV1-21 601 68.07% (194/285 nt) 646, 69.82% (199/285 nt) 664, 70.53% (201/285 nt)
IGHV1-20 646, 69.82% (199/285 nt) 673, 70.88% (202/285 nt) 691, 71.58% (204/285 nt)
IGHV1-17 628, 69.12% (197/285 nt) 646, 69.82% (199/285 nt) 673, 70.88% (202/285 nt)
IGHV1-14 664, 70.53% (201/285 nt) 592, 67.72% (193/285 nt) 691, 71.58% (204/285 nt)
IGHV1-10 637, 69.47% (198/285 nt) 646, 69.82% (199/285 nt) 691, 71.58% (204/285 nt)
IGHV1-7 610, 68.42% (195/285 nt) 583, 67.37% (192/285 nt) 646, 69.82% (199/285 nt)
IMGT notes:
  1. (1) The Bos taurus (cattle) IGHV subgroups are from [1]
IMGT references:
  1. [1] Ma L. et al. J Immunol. 2016 May 15;196(10):4358-66. doi: 10.4049/jimmunol.1600158. Epub 2016 Apr 6.. PMID:27053761
Created:
22/08/2017
Last updated:
22/09/2023
Authors:
Perrine Pégorier