IMGT Repertoire (RPI)

Alignment of alleles: Mouse VPREB1

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By homology with the IG and TR V-DOMAINs, the limits of the putative CDR3-IMGT are shown.

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 Accession        Allele
  number           name
___________________________________________________________________________________________________________________________________

 	                               1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
	                              Q   P   M   V   H   Q   P   P   L       A   S   S   S   L   G   A   T   I   R
  X05557  ,	VPREB1*01            CAG CCC ATG GTG CAT CAG CCA CCA TTA ... GCA TCT TCT TCC CTT GGA GCC ACC ATC CGC

  X05556  ,	VPREB1*01 (cDNA)     --- --- --- --- --- --- --- --- --- ... --- --- --- --- --- --- --- --- --- ---


         	                                               ___________________CDR1-IMGT____________________
 	                              21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
  	                              L   S   C   T   L   S   N   D   H   N   I   G   I   Y   S               I   Y
  X05557  ,	VPREB1*01            CTC TCC TGT ACC CTG AGC AAC GAC CAT AAC ATT GGC ATT TAC AGC ... ... ... ATT TAC

  X05556  ,	VPREB1*01            --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ... ... ... --- ---


                                                                                            _______________CDR2-
 	                              41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
 	                              W   Y   Q   Q   R   P   G   H   P   P   R   F   L   L   R   Y   F   S   H   S
  X05557  ,	VPREB1*01            TGG TAC CAG CAG AGG CCG GGC CAC CCT CCC AGG TTC CTG CTG AGA TAC TTC TCA CAC TCA

  X05556  ,	VPREB1*01            --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


	                              IMGT________________
 	                              61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
 	                              D   K               H   Q   G   P   D   I   P       P   R   F   S   G   S   K
  X05557  ,	VPREB1*01            GAC AAG ... ... ... CAC CAG GGT CCC GAT ATC CCA ... CCT CGC TTC TCC GGG TCC AAA

  X05556  ,	VPREB1*01            --- --- ... ... ... --- --- --- --- --- --- --- ... --- --- --- --- --- --- ---


 	                              81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
 	                              D   T   T   R   N   L   G   Y   L   S   I   S   E   L   Q   P   E   D   E   A
  X05557  ,	VPREB1*01            GAT ACG ACC AGG AAC CTG GGG TAT CTG AGC ATC TCT GAA CTG CAG CCT GAG GAC GAG GCT

  X05556  ,	VPREB1*01            --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


	                                             _______________________CDR3-IMGT_______________________ 
	                             101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120
 	                              V   Y   Y   C   A   V   G   L   R   S   Q   E   K   K   R   M   E   R   E   W
  X05557  ,	VPREB1*01            GTG TAT TAC TGT GCC GTG GGG CTC CGG AGC CAG GAA AAG AAG AGG ATG GAG AGG GAG TGG

  X05556  ,	VPREB1*01            --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


	                             121 122 123 124 125 126 127 128 129 130 131
	                              E   G   E   K   S   Y   T   D   L   G   S   *
  X05557  ,	VPREB1*01            GAA GGA GAA AAG TCG TAT ACA GAT TTG GGA TCT

  X05556  ,	VPREB1*01            --- --- --- --- --- --- --- --- --- --- ---

Legend:

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters.
These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps by comparison to the longest sequence.
Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

See also:

IMGT Repertoire:
IMGT Scientific chart:
- IMGT unique numbering for V-DOMAIN and V-LIKE-DOMAIN
IMGT Index:
IMGT Education (FR):
- La superfamille des immunoglobulines (IgSF)
Tools: