IMGT RPI entry from gene to protein for Homo sapiens VPREB3

Citing IMGT RPI entry for VPREB3

Duprat, E. et al. IMGT standardization for alleles and mutations of the V-LIKE-DOMAINs and C-LIKE-DOMAINs of the immunoglobulin superfamily, Recent Research Developments in Human Genetics, 2, 111-136 (2004) pdf with permission from Research Signpost

IMGT gene name and definition

Chromosomal localization

Gene exon/intron organization

VPREB3 Gene exon/intron organization

Legend:

Number of alleles: 1

IMGT reference alleles

Allele names Gene functionality Clone name IMGT reference sequences
Exons Accession numbers Molecule type
VPREB3*01 F EX1-2 AP000348[1] gDNA

IMGT reference sequences (in FASTA format) for the allele(s): VPREB3*01

Other sequences from the literature

Allele names Gene functionality Clone name IMGT reference sequences
Exons Accession numbers Molecule type
VPREB3*01 F EX1-2 AP000348 gDNA

Corresponding protein database accession numbers

Allele names Accession numbers Number of amino acids Protein isoform
Nucleotide databases Protein databases
VPREB3*01 AP000348 Q9UKI3 125 aa 1
NM_013378 NP_037510 125 aa 1
IMGT notes:
IMGT references:
  1. [1] Shimizu N., Unpublished.
  2. [2] Rosnet O., Unpublished.

Genomic sequence

Coding region sequence

The coding region (CODING-REGION) sequence starts from INIT-CODON (or its encoded amino acid) to STOP-CODON (not included).
The nucleotide sequence is extracted from cDNA (c) sequences and/or is built by artificial exon joining from genomic DNA (g) sequences. The amino acid sequence is the translation of the nucleotide sequence.

VPREB3*01: AP000348(g)

Nucleotide sequence

1        atggcctgcc ggtgcctcag cttccttctg atggggacct tcctgtcagt cgcagtttcc

61       cagacagtcc tggcccagct ggatgcactg ctggtcttcc caggccaagt ggctcaactc

121      tcctgcacgc tcagccccca gcacgtcacc atcagggact acggtgtgtc ctggtaccag

181      cagcgggcag gcagtgcccc tcgatatctc ctctactacc gctcggagga ggatcaccac

241      cggcctgctg acatccccga tcgattctcg gcagccaagg atgaggccca caatgcctgt

301      gtcctcacca ttagtcccgt gcagcctgaa gacgacgcgg attactactg ctctgttggc

361      tacggcttta gtccctga
Nucleotide sequence in FASTA format (without gaps) VPREB3*01

Amino acid sequence

1        MACRCLSFLL MGTFLSVAVS QTVLAQLDAL LVFPGQVAQL SCTLSPQHVT IRDYGVSWYQ

61       QRAGSAPRYL LYYRSEEDHH RPADIPDRFS AAKDEAHNAC VLTISPVQPE DDADYYCSVG

121      YGFSP*
Amino acid sequence in FASTA format (without gap) VPREB3*01

Legend: