IMGT/JunctionAnalysis
IMGT/JunctionAnalysis [1] is part of IMGT, the international ImMunoGeneTics information system® http://www.imgt.org [1].
IMGT/JunctionAnalysis, created by LIGM (Université Montpellier II, CNRS), is an IMGT tool for sequence analysis,
on the Web since 17 June 2001.
IMGT/JunctionAnalysis is a tool, complementary to IMGT/V-QUEST,
which provides a thorough analysis of the V-J and V-D-J junctions of the immunoglobulin (IG) and T cell receptor (TR)
rearranged genes.
IMGT/JunctionAnalysis delimits precisely the P and N regions of the V-J junctions. In the case of V-D-J junctions (IGH, TRB and TRD), it identifies the D-GENE and allele involved in the V-D-J rearrangements by comparison with the IMGT reference directory, and delimits precisely the P, N and D regions. Several hundreds of junction sequences can be analysed simultaneously.
Citing IMGT:
Lefranc, M.-P.
"IMGT, the international ImMunoGeneTics database®"
Nucleic Acids Res., 31, 307-310 (2003)
Full text,
PMID:12520009,
LIGM:267
Citing IMGT/JunctionAnalysis:
Yousfi Monod, M., Giudicelli, V., Chaume, D. and Lefranc, M.-P.
"IMGT/JunctionAnalysis: the first tool for the analysis of the immunoglobulin and T cell receptor complex V-J and V-D-J JUNCTIONs".
Bioinformatics 
, 20, I379-I385 (2004),
PMID:15262823,
LIGM:289
References:
[1] Yousfi Monod, M. et al.,
Bioinformatics , 20, I379-I385 (2004),
PMID:15262823,
LIGM:289
[2] Lefranc, M.-P.,
Nucleic Acids Res., 31, 307-310 (2003)
Full text,
PMID:12520009,
LIGM:267