Here you are: IMGT Web resources > IMGT Repertoire > 2. Proteins and alleles
Citing IMGT reference directory:
Lefranc, M.-P. and Lefranc, G. The Immunoglobulin FactsBook Academic Press, London, UK (458 pages), (2001)
Lefranc, M.-P. and Lefranc, G. The T cell receptor FactsBook Academic Press, London, UK (398 pages), (2001)
Introduction
IMGT/V-QUEST reference directory sets
- IMGT/V-QUEST reference directory sets per IMGT Group
- IMGT/V-QUEST reference directory sets per taxon
- IMGT/V-QUEST reference directory sets for several taxons
IMGT/GENE-DB reference directory sets
References


Introduction

The IMGT reference directory in
FASTA format is constituted by sets of immunoglobulin (IG) or T cell receptor (TR) sequences which are isolated from the IMGT reference sequences from IMGT/GENE-DB.

IMGT/V-QUEST reference directory sets release 202430-2 (23 July 2024)

Overview Download

IMGT/V-QUEST reference directory sets per IMGT Group

In the V-REGION sets, IMGT gaps have been introduced according to the IMGT unique numbering [1] [2] [3] [4].

 F+ORF+in-frame P
IMGT GroupsNucleotides
IGHV Human, Mouse, Rat, Rabbit, Rhesus monkey, Sheep, Pig, Teleostei, Atlantic cod, Channel catfish, Rainbow trout, Zebrafish, Chondrichthyes, Platypus, Alpaca, Crab-eating macaque, Bovine, Dog, Chicken, Salmon, Horse, Gorilla, Lemur, Orangutan, Bornean orangutan, Ferret, Mouse C57BL/6J
IGHD Human, Mouse, Rat, Rabbit, Rhesus monkey, Pig, Rainbow trout, Zebrafish, Chondrichthyes, Platypus, Alpaca, Crab-eating macaque, Bovine, Dog, Sheep, Chicken, Salmon, Horse, Gorilla, Lemur, Orangutan, Bornean orangutan, Ferret, Mouse C57BL/6J
IGHJ Human, Mouse, Rat, Rabbit, Sheep, Rhesus monkey, Pig, Rainbow trout, Zebrafish, Chondrichthyes, Platypus, Alpaca, Crab-eating macaque, Bovine, Dog, Chicken, Salmon, Horse, Gorilla, Lemur, Orangutan, Bornean orangutan, Ferret, Mouse C57BL/6J
IGKV Human, Mouse, Rat, Rabbit, Pig, Rhesus monkey, Dog, Goat, Sheep, Bovine, Cat, Horse, Camel, Lemur, Gorilla, Orangutan, Bornean orangutan, Ferret, Mouse C57BL/6J
IGKJ Human, Mouse, Rat, Rabbit, Pig, Rhesus monkey, Dog, Goat, Sheep, Bovine, Cat, Horse, Camel, Lemur, Gorilla, Orangutan, Bornean orangutan, Ferret, Mouse C57BL/6J
IGLV Human, Mouse, Rat, Rabbit, Pig, Rhesus monkey, Dog, Chicken, Cat, Bovine, Goat, Sheep, Gorilla, Orangutan, Bornean orangutan, Lemur, Mouse C57BL/6J, Ferret
IGLJ Human, Mouse, Rat, Rabbit, Pig, Rhesus monkey, Dog, Chicken, Cat, Bovine, Goat, Gorilla, Orangutan, Bornean orangutan, Lemur, Mouse C57BL/6J, Ferret
IGIV Teleostei, Zebrafish
IGIJ Zebrafish
 F+ORF+in-frame P
IMGT GroupsNucleotides
TRAV Human, Mouse, Ma's night monkey, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Cat, Bovine, Naked mole-rat, Mouse C57BL/6J, Gorilla, Ferret
TRAJ Human, Mouse, Ma's night monkey, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Cat, Bovine, Naked mole-rat, Mouse C57BL/6J, Gorilla, Ferret
TRBV Human, Mouse, Ma's night monkey, Rhesus Monkey , Rainbow trout, Dog, Ferret, Rabbit, Pig, Cat, Sheep, Camel, Crab-eating macaque, Naked mole-rat, Bovine, Mouse C57BL/6J, Gorilla
TRBD Human, Mouse, Ma's night monkey, Rainbow trout, Dog, Ferret, Rabbit, Pig, Cat, Sheep, Camel, Crab-eating macaque, Naked mole-rat, Bovine, Mouse C57BL/6J, Gorilla
TRBJ Human, Mouse, Ma's night monkey, Rhesus Monkey , Rainbow trout, Dog, Ferret, Rabbit, Pig, Cat, Sheep, Camel, Crab-eating macaque, Naked mole-rat, Bovine, Mouse C57BL/6J, Gorilla
TRGV Human, Mouse, Ma's night monkey, Bovine, Camel, Dog, Bottlenose dolphin, Rabbit, Cat, Rhesus Monkey , Naked mole-rat, Gorilla, Mouse C57BL/6J, Ferret
TRGJ Human, Mouse, Ma's night monkey, Bovine, Camel, Dog, Bottlenose dolphin, Rabbit, Cat, Rhesus Monkey , Naked mole-rat, Gorilla, Mouse C57BL/6J, Ferret
TRDV Human, Mouse, Ma's night monkey, Bovine, Camel, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Cat, Naked mole-rat, Gorilla, Mouse C57BL/6J, Ferret
TRDD Human, Mouse, Ma's night monkey, Bovine, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Cat, Naked mole-rat, Gorilla, Mouse C57BL/6J, Ferret
TRDJ Human, Mouse, Ma's night monkey, Bovine, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Cat, Naked mole-rat, Gorilla, Mouse C57BL/6J, Ferret

IMGT/V-QUEST reference directory sets per taxon

    F+ORF+in-frame P
  IMGT Groups IG TR
MAMMALIA EUTHERIA (placentals) Homo sapiens
(human)
IGHV, IGHD, IGHJ
IGKV, IGKJ
IGLV, IGLJ
TRAV, TRAJ
TRBV, TRBD, TRBJ
TRDV, TRDD, TRDJ
TRGV, TRGJ
Mus musculus, Mus spretus
(mouse) (1)
IGHV, IGHD, IGHJ
IGKV (2), IGKJ
IGLV, IGLJ
TRAV, TRAJ
TRBV, TRBD, TRBJ
TRDV, TRDD, TRDJ
TRGV, TRGJ
Mus musculus
(strain C57BL/6J)
IGHV, IGHD, IGHJ
IGKV, IGKJ
IGLV, IGLJ
TRAV, TRAJ
TRBV, TRBD, TRBJ
Aotus nancymaae
(Ma's night monkey)
  TRAV , TRAJ
TRBV , TRBJ
TRGV , TRGJ
TRDV , TRDJ
Bos taurus
(bovine)
IGHV, IGHD, IGHJ
IGKV, IGKJ
IGLV, IGLJ
TRAV, TRAJ
TRBV, TRBD, TRBJ
TRDV, TRDD, TRDJ
TRGV, TRGJ
Camelus dromedarius
(Arabian camel)
IGKV, IGKJ TRBV, TRBD, TRBJ
TRDV
TRGV, TRGJ
Canis lupus familiaris
(dog)
IGHV, IGHD, IGHJ
IGKV, IGKJ
IGLV, IGLJ,
TRAV, TRAJ
TRBV, TRBD, TRBJ
TRDV, TRDD, TRDJ
TRGV, TRGJ
Capra hircus
(goat)
IGKV, IGKJ
IGLV, IGLJ
 
Equus caballus
(horse)
IGKV, IGKJ
IGHV, IGHD, IGHJ
 
Felis catus
(Domestic cat)
IGKV, IGKJ, IGLV, IGLJ TRAV, TRAJ
TRBV, TRBD, TRBJ
TRDV, TRDD, TRDJ
TRGV, TRGJ
Gorilla gorilla gorilla
(lowland gorilla)
IGHV, IGHD, IGHJ
IGKV, IGKJ
IGLV, IGLJ
TRAV, TRAJ
TRBV, TRBD, TRBJ
TRDV, TRDD, TRDJ
TRGV, TRGJ
Heterocephalus glaber
(Naked mole-rat)
  TRAV, TRAJ
TRBV, TRBD, TRBJ
TRDV, TRDD, TRDJ
TRGV, TRGJ
Lemur catta
(Ring-tailed lemur)
IGHV, IGHD, IGHJ
IGKV, IGKJ
IGLV, IGLJ
 
Macaca fascicularis
(crab-eating macaque)
IGHV, IGHD, IGHJ TRBV, TRBD, TRBJ
Macaca mulatta
(Rhesus monkey)
IGHV, IGHD, IGHJ
IGKV, IGKJ
IGLV, IGLJ
TRAV, TRAJ
TRBV, TRBD, TRBJ
TRDV, TRDD, TRDJ
TRGV, TRGJ

Mustela putorius furo
(ferret)
IGHV, IGHD, IGHJ
IGKV, IGKJ
IGLV, IGLJ
TRAV, TRAJ
TRBV, TRBD, TRBJ
TRGV, TRGJ
TRDV, TRDD, TRDJ
Oryctolagus cuniculus
(rabbit)
IGHV, IGHD, IGHJ
IGKV, IGKJ
IGLV, IGLJ
TRAV, TRAJ
TRBV, TRBD, TRBJ
TRDV, TRDD, TRDJ TRGV, TRGJ
Ovis aries
(sheep)
IGHV, IGHD, IGHJ
IGKV, IGKJ
IGLV, IGLJ
TRAV, TRAJ,
TRBV, TRBD, TRBJ,
TRDV, TRDD, TRDJ
Pongo abelii
(Sumatran orangutan)
IGHV, IGHD, IGHJ
IGKV, IGKJ
IGLV, IGLJ
 
Pongo pygmaeus
(Bornean orangutan)
IGHV, IGHD, IGHJ
IGKV, IGKJ
IGLV, IGLJ
 
Rattus norvegicus
(Norway rat) (3)
IGHV, IGHD, IGHJ
IGKV, IGKJ
IGLV, IGLJ
 
Sus scrofa
(pig)
IGHV, IGHD, IGHJ
IGKV, IGKJ
IGLV, IGLJ
TRBV, TRBD, TRBJ
Tursiops truncatus
(bottlenose dolphin)
  TRAV, TRAJ
TRDV, TRDD, TRDJ
TRGV, TRGJ
Vicugna pacos
(alpaca)
IGHV, IGHD, IGHJ  
MAMMALIA PROTHERIA (monotremes) Ornithorhynchus anatinus
(platypus)
IGHV, IGHD, IGHJ  
AVES (birds) Gallus gallus
(chicken)
IGHV, IGHD, IGHJ
IGLV, IGLJ
 
TELEOSTEI (4) Danio rerio
(zebrafish)
IGHV, IGHD, IGHJ
IGIV, IGIJ
TRAV TRAJ
TRDV, TRDD, TRDJ
Gadus morhua
(Atlantic cod)
IGHV  
Ictalurus punctatus
(Channel catfish)
IGHV  
Oncorhynchus mykiss
(Rainbow trout)
IGHV, IGHD, IGHJ, TRBV, TRBD, TRBJ
Salmo salar
(Atlantic salmon)
IGHV , IGHD , IGHJ  
CHONDRICHTHYES (5)      

IMGT/V-QUEST reference directory sets for several taxons

Teleostei: IGHV , IGIV

The Teleostei IGHV and IGIV sets contain pooled sequences from several species (detailed in the table below).
These sets are not included in IMGT/HighV-QUEST.
The Teleostei pooled IGHD and IGHJ sets are not currently available.
TeleosteiIMGT Group
Number of sequences
Latin name English name short name IGHV IGIV
Anarhichas minor Spotted wolffish Anamin102
Carassius auratus Goldfish Caraur4-
Chaenocephalus aceratus Blackfin icefishChaace2-
Cyprinus carpio Common carp Cypcar-29
Danio rerio Zebrafish Danrer4111
Dicentrarchus labrax European sea bass Diclab-18
Elops saurus Ladyfish Elosau2-
Gadus morhua Atlantic cod Gadmor7634
Ictalurus punctatus Channel catfish Ictpun4010
Notothenia corricepsYellowbelly rockcodNotcor4-
Oncorhynchus mykiss Rainbow trout Oncmyk7717
Paralichthys olivaceus Bastard halibut Paroli3-
Salvelinus alpinus Charr Salalp13-
Salmo salar Atlantic salmon Salsal15016
Scophthalmus maximus Turbot Scomax1-
Seriola quinqueradiata Five-ray yellowtail Serqui-40
Siniperca chuatsi Chinese perch Sinchu-5
Takifugu rubripes TorafuguTakrub9-
Trematomus bernachii Emerald rockcod Treber38-

Chondrichthyes: IGHV , IGHD , IGHJ

The Chondrichthyes IGHV , IGHD and IGHJ sets contain pooled sequences from several species sets
(detailed in the table below).
These sets are not included in IMGT/HighV-QUEST.
ChondrichtyesIMGT Group
Number of sequences
Latin name English name short name IGHV IGHD IGHJ
Carcharhinus leucas Bull shark Carleu444
Carcharhinus plumbeus Sandbar shark Carplu888
Ginglyomostoma cirratum Nurse shark Gincir535952
Heterodontus francisci Horned shark Hetfra172418
Hydrolagus colliei Spotted ratfish Hydcol121715
Leucoraja erinacea Little skate Leueri575
Orectolobus maculatus Spotted wobbegong sharkOremac888
Raja eglanteria Clearnose skate Rajegl151

Notes

(1) Mouse IG set contains sequences from Mus musculus plus 9 from Mus spretus (IGKV: Musspr_IGKV10-94*01, Musspr_IGKV10-96*01; IGLV: Musspr_IGLV2*01, Musspr_IGLV3*01, Musspr_IGLV4*01, Musspr_IGLV4*02, Musspr_IGLV8*01; IGLJ Musspr_IGLJ4*01, Musspr_IGLJ5*01,).
(2) The IGKV4-52*01 (AJ239198) and the IGKV4-54*01 (AJ231223) V-REGION nucleotide sequences are 100% identical. These two genes differ by one nucleotide in their L-PART2 (at position 12 according to the IMGT numbering).
(3) The IGHV and IGLV genes have a provisional nomenclature which may be updated. The definitive nomenclature will be available once the rat IGH and IGL locus are completely sequenced.
(4) Teleostei are available as separate sets for 5 species as shown in the table per taxon and as pooled with sequences of other species (in the set 'Teleostei' for several taxons).
(5) Chondrichthyes are currently only available as pooled sequences of several species (in the set 'Chondrichthyes' for several taxons).

IMGT/GENE-DB reference directory sets

The available IMGT/GENE-DB reference directory sets are the following :


They are divided in:

Note that the IMGT/GENE-DB sets also include the orphons.


IMGT/GENE-DB also provides examples of artificially spliced sequences (for more exhaustive functionalities, please query IMGT/GENE-DB):

List of direct links to query IMGT/GENE-DB
 

IG "V-REGION", "D-REGION", "J-REGION", "C-GENE exon" sets

  F+ORF+all P F+ORF+in-frame P F+ORF+in-frame P with IMGT gaps
IMGT Groups Nucleotides Nucleotides Amino acids Nucleotides Amino acids
IGHV Human, Mouse, Rat, Rabbit, Rainbow trout, Rhesus monkey, Pig, Zebrafish, Platypus, Alpaca, Crab-eating macaque, Bovine, Dog, Chicken, Atlantic salmon, Horse, Gorilla, Lemur, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rabbit, Rainbow trout, Rhesus monkey, Pig, Zebrafish, Platypus, Alpaca, Crab-eating macaque, Bovine, Dog, Chicken, Atlantic salmon, Horse, Gorilla, Lemur, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rabbit, Rainbow trout, Rhesus monkey, Pig, Zebrafish, Platypus, Alpaca, Crab-eating macaque, Bovine, Dog, Chicken, Atlantic salmon, Horse, Gorilla, Lemur, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rabbit, Rainbow trout, Rhesus monkey, Pig, Zebrafish, Platypus, Alpaca, Crab-eating macaque, Bovine, Dog, Chicken, Atlantic salmon, Horse, Gorilla, Lemur, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rabbit, Rainbow trout, Rhesus monkey, Pig, Zebrafish Platypus, Alpaca, Crab-eating macaque, Bovine, Dog, Chicken, Atlantic salmon, Horse, Gorilla, Lemur, Sumatran orangutan, Bornean orangutan, Ferret
IGHD Human, Mouse, Rat, Rabbit, Rainbow trout, Rhesus monkey, Pig, Zebrafish, Platypus, Alpaca, Crab-eating macaque, Bovine, Dog, Sheep, Chicken, Atlantic salmon, Horse, Gorilla, Lemur, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rabbit, Rainbow trout, Rhesus monkey, Pig, Zebrafish, Platypus, Alpaca, Crab-eating macaque, Bovine, Dog, Sheep, Chicken, Atlantic salmon, Horse, Gorilla, Lemur, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rabbit, Rainbow trout, Rhesus monkey, Pig, Zebrafish, Platypus, Alpaca, Crab-eating macaque, Bovine, Dog Sheep, Chicken, Atlantic salmon, Horse, Gorilla, Lemur, Sumatran orangutan, Bornean orangutan, Ferret    
IGHJ Human, Mouse, Rat, Rabbit, Rainbow trout, Rhesus monkey, Pig, Zebrafish, Platypus, Alpaca, Crab-eating macaque, Bovine, Dog, Chicken, Atlantic salmon, Horse, Gorilla, Lemur, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rabbit, Rainbow trout, Rhesus monkey, Pig, Zebrafish, Platypus, Alpaca, Crab-eating macaque, Bovine, Dog, Chicken, Atlantic salmon, Horse, Gorilla, Lemur, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rabbit, Rainbow trout, Rhesus monkey, Pig, Zebrafish, Platypus, Alpaca, Crab-eating macaque, Bovine, Dog, Chicken, Atlantic salmon, Horse, Gorilla, Lemur, Sumatran orangutan, Bornean orangutan, Ferret    
IGHC Human, Mouse, Rat, Rainbow trout, Pig, Platypus, Alpaca, Crab-eating macaque, Bovine, Dog, Atlantic salmon, Horse, Gorilla, Lemur, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rainbow trout, Pig, Platypus, Alpaca, Crab-eating macaque, Bovine, Dog, Atlantic salmon, Horse, Gorilla, Lemur, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rainbow trout, Pig, Platypus, Alpaca, Crab-eating macaque, Bovine, Dog, Atlantic salmon, Horse, Gorilla, Lemur, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rainbow trout, Pig, Platypus, Alpaca, Crab-eating macaque, Bovine, Dog, Atlantic salmon, Horse, Gorilla, Lemur, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rainbow trout, Pig, Platypus, Alpaca, Crab-eating macaque, Bovine, Dog, Atlantic salmon, Horse, Gorilla, Lemur, Sumatran orangutan, Bornean orangutan, Ferret
IGKV Human, Mouse, Pig, Rat, Rabbit, Rhesus monkey, Dog, Goat, Sheep, Cat, Horse, Camel, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Pig, Rat, Rabbit, Rhesus monkey, Dog, Goat, Sheep, Cat, Horse, Camel, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Pig, Rat, Rabbit, Rhesus monkey, Dog, Goat, Sheep, Cat, Horse, Camel, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Pig, Rat, Rabbit, Rhesus monkey, Dog, Goat, Sheep, Cat, Horse, Camel, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Pig, Rat, Rabbit, Rhesus monkey, Dog, Goat, Sheep, Cat, Horse, Camel, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret
IGKJ Human, Mouse, Pig, Rat, Rabbit, Rhesus monkey, Dog, Goat, Sheep, Cat, Horse, Camel, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Pig, Rat, Rabbit, Rhesus monkey, Dog, Goat, Sheep, Cat, Horse, Camel, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Pig, Rat, Rabbit, Rhesus monkey, Dog, Goat, Sheep, Cat, Horse, Camel, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret    
IGKC Human, Mouse, Pig, Rat, Rabbit, Dog, Goat, Sheep, Cat, Horse, Camel, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Pig, Rat, Rabbit, Dog, Goat, Sheep, Cat, Horse, Camel, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Pig, Rat, Rabbit, Dog, Goat, Sheep, Cat, Horse, Camel, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Pig, Rat, Rabbit, Dog, Goat, Sheep, Cat, Horse, Camel, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Pig, Rat, Rabbit, Dog, Goat, Sheep, Cat, Horse, Camel, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret
IGLV Human, Mouse, Rat, Rabbit, Rhesus monkey, Pig, Dog, Chicken, Cat, Sheep, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rabbit, Rhesus monkey, Pig, Dog, Chicken, Cat, Sheep, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rabbit, Rhesus monkey, Pig, Dog, Chicken, Cat, Sheep, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rabbit, Rhesus monkey, Pig, Dog, Chicken, Cat, Sheep, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rabbit, Rhesus monkey, Pig, Dog, Chicken, Cat, Sheep, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret
IGLJ Human, Mouse, Rat, Rabbit, Rhesus monkey, Pig, Dog, Chicken, Cat, Sheep, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rabbit, Rhesus monkey, Pig, Dog, Chicken, Cat, Sheep, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rabbit, Rhesus monkey, Pig, Dog, Chicken, Cat, Sheep, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret    
IGLC Human, Mouse, Rat, Rabbit, Pig, Rhesus monkey, Dog, Chicken, Cat, Sheep, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rabbit, Pig, Rhesus monkey, Dog, Chicken, Cat, Sheep, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rabbit, Pig, Rhesus monkey, Dog, Chicken, Cat, Sheep, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rabbit, Pig, Rhesus monkey, Dog, Chicken, Cat, Sheep, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rabbit, Pig, Rhesus monkey, Dog, Chicken, Cat, Sheep, Bovine, Lemur, Gorilla, Sumatran orangutan, Bornean orangutan, Ferret
IGIV Zebrafish Zebrafish Zebrafish Zebrafish Zebrafish
IGIJ Zebrafish Zebrafish Zebrafish    
IGIC Zebrafish Zebrafish Zebrafish Zebrafish Zebrafish

TR "V-REGION", "D-REGION", "J-REGION", "C-GENE exon" sets

  F+ORF+all P F+ORF+in-frame P F+ORF+in-frame P with IMGT gaps
IMGT Groups Nucleotides Nucleotides Amino acids Nucleotides Amino acids
TRAV Human, Mouse, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Bovine, Naked mole-rat, Gorilla, Ferret Human, Mouse, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Bovine, Naked mole-rat, Gorilla, Ferret Human, Mouse, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Bovine, Naked mole-rat, Gorilla, Ferret Human, Mouse, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Bovine, Naked mole-rat, Gorilla, Ferret Human, Mouse, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Bovine, Naked mole-rat, Gorilla, Ferret
TRAJ Human, Mouse, Bovine, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Bovine, Naked mole-rat, Gorilla, Ferret Human, Mouse, Bovine, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Bovine, Naked mole-rat, Gorilla, Ferret Human, Mouse, Bovine, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Bovine, Naked mole-rat, Gorilla, Ferret    
TRAC Human, Mouse, Bovine, Sheep, Zebrafish, Dog, Bottlenose dolphin, Rabbit, Bovine, Naked mole-rat, Gorilla, Ferret Human, Mouse, Bovine, Sheep, Zebrafish, Dog, Bottlenose dolphin, Rabbit, Bovine, Naked mole-rat, Gorilla, Ferret Human, Mouse, Bovine, Sheep, Zebrafish, Dog, Bottlenose dolphin, Rabbit, Bovine, Naked mole-rat, Gorilla, Ferret Human, Mouse, Bovine, Sheep, Zebrafish, Dog, Bottlenose dolphin, Rabbit, Bovine, Naked mole-rat, Gorilla, Ferret Human, Mouse, Bovine, Sheep, Zebrafish, Dog, Bottlenose dolphin, Rabbit, Bovine, Naked mole-rat, Gorilla, Ferret
TRBV Human, Mouse, Rhesus Monkey, Dog, Rainbow trout, Ferret, Rabbit, Pig, Cat, Sheep, Crab-eating macaque, Naked mole-rat, Bovine, Gorilla Human, Mouse, Rhesus Monkey, Dog, Rainbow trout, Ferret, Rabbit, Pig, Cat, Sheep, Crab-eating macaque, Naked mole-rat, Bovine, Gorilla Human, Mouse, Rhesus Monkey, Dog, Rainbow trout, Ferret, Rabbit, Pig, Cat, Sheep, Crab-eating macaque, Naked mole-rat, Bovine, Gorilla Human, Mouse, Rhesus Monkey, Dog, Rainbow trout, Ferret, Rabbit, Pig, Cat, Sheep, Crab-eating macaque, Naked mole-rat, Bovine, Gorilla Human, Mouse, Rhesus Monkey, Dog, Rainbow trout, Ferret, Rabbit, Pig, Cat, Sheep, Crab-eating macaque, Naked mole-rat, Bovine, Gorilla
TRBD Human, Mouse, Rhesus Monkey, Dog, Rainbow trout, Ferret, Rabbit, Pig, Cat, Sheep, Crab-eating macaque, Naked mole-rat, Bovine, Gorilla Human, Mouse, Rhesus Monkey, Dog, Rainbow trout, Ferret, Rabbit, Pig, Cat, Sheep, Crab-eating macaque, Naked mole-rat, Bovine, Gorilla Human, Mouse, Rhesus Monkey, Dog, Rainbow trout, Ferret, Rabbit, Pig, Cat, Sheep, Crab-eating macaque, Naked mole-rat, Bovine, Gorilla    
TRBJ Human, Mouse, Rhesus Monkey, Dog, Rainbow trout, Atlantic salmon, Rabbit, Ferret, Pig, Cat, Sheep, Crab-eating macaque, Naked mole-rat, Bovine, Gorilla Human, Mouse, Rhesus Monkey, Dog, Rainbow trout, Ferret, Rabbit, Pig, Cat, Sheep, Crab-eating macaque, Naked mole-rat, Bovine, Gorilla Human, Mouse, Rhesus Monkey, Dog, Rainbow trout, Ferret, Rabbit, Pig, Cat, Sheep, Crab-eating macaque, Naked mole-rat, Bovine, Gorilla    
TRBC Human, Mouse, Dog, Ferret, Rabbit, Pig, Cat, Sheep, Crab-eating macaque, Naked mole-rat, Bovine, Gorilla Human, Mouse, Dog, Ferret, Rabbit, Pig, Cat, Sheep, Crab-eating macaque, Naked mole-rat, Bovine, Gorilla Human, Mouse, Dog, Ferret, Rabbit, Pig, Cat, Sheep, Crab-eating macaque, Naked mole-rat, Bovine, Gorilla Human, Mouse, Dog, Ferret, Rabbit, Pig, Cat, Sheep, Crab-eating macaque, Naked mole-rat, Bovine, Gorilla Human, Mouse, Dog, Ferret, Rabbit, Pig, Cat, Sheep, Crab-eating macaque, Naked mole-rat, Bovine, Gorilla
TRGV Human, Mouse, Dog, Bovine, Camel, Bottlenose dolphin, Rabbit, Cat, Rhesus Monkey, Naked mole-rat, Gorilla, Ferret Human, Mouse, Dog, Bovine, Camel, Bottlenose dolphin, Rabbit, Cat, Rhesus Monkey, Naked mole-rat, Gorilla, Ferret Human, Mouse, Dog, Bovine, Camel, Bottlenose dolphin, Rabbit, Cat, Rhesus Monkey, Naked mole-rat, Gorilla, Ferret Human, Mouse, Dog, Bovine, Camel, Bottlenose dolphin, Rabbit, Cat, Rhesus Monkey, Naked mole-rat, Gorilla, Ferret Human, Mouse, Dog, Bovine, Camel, Bottlenose dolphin, Rabbit, Cat, Rhesus Monkey, Naked mole-rat, Gorilla, Ferret
TRGJ Human, Mouse, Dog, Bovine, Camel, Bottlenose dolphin, Rabbit, Cat, Rhesus Monkey, Naked mole-rat, Gorilla, Ferret Human, Mouse, Dog, Bovine, Camel, Bottlenose dolphin, Rabbit, Cat, Rhesus Monkey, Naked mole-rat, Gorilla, Ferret Human, Mouse, Dog, Bovine, Camel, Bottlenose dolphin, Rabbit, Cat, Rhesus Monkey, Naked mole-rat, Gorilla, Ferret    
TRGC Human, Mouse, Dog, Bottlenose dolphin, Rabbit, Cat, Rhesus Monkey, Naked mole-rat, Gorilla, Ferret Human, Mouse, Dog, Bottlenose dolphin, Rabbit, Cat, Rhesus Monkey, Naked mole-rat, Gorilla, Ferret Human, Mouse, Dog, Bottlenose dolphin, Rabbit, Cat, Rhesus Monkey, Naked mole-rat, Gorilla, Ferret Human, Mouse, Dog, Bottlenose dolphin, Rabbit, Cat, Rhesus Monkey, Naked mole-rat, Gorilla, Ferret Human, Mouse, Dog, Bottlenose dolphin, Rabbit, Cat, Rhesus Monkey, Naked mole-rat, Gorilla, Ferret
TRDV Human, Mouse, Bovine, Camel, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Naked mole-rat, Gorilla, Ferret Human, Mouse, Bovine, Camel, Sheep Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Naked mole-rat, Gorilla, Ferret Human, Mouse, Bovine, Camel, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Naked mole-rat, Gorilla, Ferret Human, Mouse, Bovine, Camel, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Naked mole-rat, Gorilla, Ferret Human, Mouse, Bovine, Camel, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Naked mole-rat, Gorilla, Ferret
TRDD Human, Mouse, Bovine, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Naked mole-rat, Gorilla, Ferret Human, Mouse, Bovine, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Naked mole-rat, Gorilla, Ferret Human, Mouse, Bovine, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Naked mole-rat, Gorilla, Ferret    
TRDJ Human, Mouse, Bovine, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Naked mole-rat, Gorilla, Ferret Human, Mouse, Bovine, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Naked mole-rat, Gorilla, Ferret Human, Mouse, Bovine, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Naked mole-rat, Gorilla, Ferret    
TRDC Human, Mouse, Sheep, Zebrafish, Bovine, Dog, Bottlenose dolphin, Rabbit, Naked mole-rat, Gorilla, Ferret Human, Mouse, Sheep, Zebrafish, Bovine, Dog, Bottlenose dolphin, Rabbit, Naked mole-rat, Gorilla, Ferret Human, Mouse, Sheep, Zebrafish, Bovine, Dog, Bottlenose dolphin, Rabbit, Naked mole-rat, Gorilla, Ferret Human, Mouse, Sheep, Zebrafish, Bovine, Dog, Bottlenose dolphin, Rabbit, Naked mole-rat, Gorilla, Ferret Human, Mouse, Sheep, Zebrafish, Bovine, Dog, Bottlenose dolphin, Rabbit, Naked mole-rat, Gorilla, Ferret

"L-PART1+L-PART2" artificially spliced sets

 F+ORF+all PF+ORF+in-frame P
IMGT Groups NucleotidesAmino acids
IGHV Human, Mouse, Rat, Rabbit, Rainbow trout, Rhesus monkey, Pig, Zebrafish, Platypus, Alpaca, Crab-eating macaque, Bovine, Dog, Chicken, Atlantic salmon, Horse, Gorilla, Lemur, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rabbit, Rainbow trout, Rhesus monkey, Pig, Zebrafish, Platypus, Alpaca, Crab-eating macaque, Bovine, Dog, Chicken, Atlantic salmon, Horse, Gorilla, Lemur, Sumatran orangutan, Bornean orangutan, Ferret
IGKV Human, Mouse, Rat, Rabbit, Pig, Rhesus monkey, Dog, Goat, Sheep, Cat, Horse, Camel, Bovine, Lemur, Gorilla, Orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rabbit, Pig, Rhesus monkey, Dog, Goat, Sheep, Cat, Horse, Camel, Bovine, Lemur, Gorilla, Orangutan, Bornean orangutan, Ferret
IGLV Human, Mouse, Rat, Rabbit, Pig, Rhesus monkey, Dog, Chicken, Cat, Sheep, Bovine, Gorilla, Orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rabbit, Pig, Rhesus monkey, Dog, Chicken, Cat, Sheep, Bovine, Gorilla, Orangutan, Bornean orangutan, Ferret
IGIV Zebrafish Zebrafish
 F+ORF+all PF+ORF+in-frame P
IMGT Groups NucleotidesAmino acids
TRAV Human, Mouse, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Bovine, Naked mole-rat, Gorilla, Ferret Human, Mouse, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Bovine, Naked mole-rat, Gorilla, Ferret
TRBV Human, Mouse, Rhesus Monkey, Dog, Rainbow trout, Dog, Ferret, Rabbit, Pig, Cat, Sheep, Crab-eating macaque, Naked mole-rat, Bovine, Gorilla Human, Mouse, Rhesus Monkey, Dog, Rainbow trout, Dog, Ferret, Rabbit, Pig, Cat, Sheep, Crab-eating macaque, Naked mole-rat, Bovine, Gorilla
TRGV Human, Mouse, Bovine, Dog, Camel, Bottlenose dolphin, Rabbit, Cat, Rhesus monkey, Naked mole-rat, Gorilla, Ferret Human, Mouse, Bovine, Dog, Camel, Bottlenose dolphin, Rabbit, Cat, Rhesus monkey, Naked mole-rat, Gorilla, Ferret
TRDV Human, Mouse, Bovine, Camel, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Naked mole-rat, Gorilla, Ferret Human, Mouse, Bovine, Camel, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Naked mole-rat, Gorilla, Ferret

"L-PART1+V-EXON" artificially spliced sets

 F+ORF+all PF+ORF+in-frame P
IMGT GroupsNucleotidesAmino acids
IGHV Human, Mouse, Rat, Rabbit, Rainbow trout, Rhesus monkey, Pig, Zebrafish, Platypus, Alpaca, Crab-eating macaque, Bovine, Dog, Chicken, Atlantic salmon, Horse, Gorilla, Lemur, Sumatran orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rabbit, Rainbow trout, Rhesus monkey, Pig, Zebrafish, Platypus, Alpaca, Crab-eating macaque, Bovine, Dog, Chicken, Atlantic salmon, Horse, Gorilla, Lemur, Sumatran orangutan, Bornean orangutan, Ferret
IGKV Human, Mouse, Rat, Rabbit, Pig, Rhesus monkey, Dog, Goat, Sheep, Cat, Horse, Camel, Bovine, Lemur, Gorilla, Orangutan, Bornean orangutan, Ferret Human, Mouse, Rat, Rabbit, Pig, Rhesus monkey, Dog, Goat, Sheep, Cat, Horse, Camel, Bovine, lemur, Gorilla, Orangutan, Bornean orangutan, Ferret
IGLV Human, Mouse, Rat, Rabbit, Pig, Rhesus monkey, Dog, Chicken, Cat, Sheep, Bovine, Gorilla, Orangutan, Bornean orangutan, Ferret Human, Mouse Rat, Rabbit, Pig, Rhesus monkey, Dog, Chicken, Cat, Sheep, Bovine, Gorilla, Orangutan, Bornean orangutan, Ferret
IGIV Zebrafish Zebrafish
 F+ORF+all PF+ORF+in-frame P
IMGT Groups NucleotidesAmino acids
TRAV Human, Mouse, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Bovine, Naked mole-rat, Gorilla, Ferret Human, Mouse, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Bovine, Naked mole-rat, Gorilla, Ferret
TRBV Human, Mouse, Rhesus Monkey, Dog, Rainbow trout, Dog, Ferret, Rabbit, Pig, Cat, Sheep, Crab-eating macaque, Naked mole-rat, Bovine, Gorilla Human, Mouse, Rhesus Monkey, Dog, Rainbow trout, Dog, Ferret, Rabbit, Pig, Cat, Sheep, Crab-eating macaque, Naked mole-rat, Bovine, Gorilla
TRGV Human, Mouse, Bovine, Dog, Camel, Bottlenose dolphin, Rabbit, Cat, Rhesus monkey, Naked mole-rat, Gorilla, Ferret Human, Mouse, Bovine, Dog, Camel, Bottlenose dolphin, Rabbit, Cat, Rhesus monkey, Naked mole-rat, Gorilla, Ferret
TRDV Human, Mouse, Bovine, Camel, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Naked mole-rat, Gorilla, Ferret Human, Mouse, Bovine, Camel, Sheep, Zebrafish, Dog, Rhesus monkey, Bottlenose dolphin, Rabbit, Naked mole-rat, Gorilla, Ferret

Constant gene artificially spliced exons sets

 F+ORF+in-frame PF+ORF+in-frame P
IMGT Groups NucleotidesAmino acids
IGHC Human, Mouse, Rat, Alpaca, Rabbit Human, Mouse, Rat, Alpaca, Rabbit
IGKC Human Human,
IGLC Human Human
 F+ORF+in-frame PF+ORF+in-frame P
IMGT Groups NucleotidesAmino acids
TRAC Human, Mouse Human, Mouse
TRBC Human, Mouse Human, Mouse
TRGC Human, Mouse Human, Mouse
TRDC Human, Mouse Human, Mouse


References:

[1] Lefranc M.-P. "Unique database numbering system for immunogenetic analysis" Immunology Today, 18: 509 (1997).
[2] Lefranc M.-P. "The IMGT unique numbering for immunoglobulins, T cell Receptors and Ig-like domains" The immunologist, 7,132-136 (1999).
[3] Lefranc M.-P. et al. "IMGT unique numbering for immunoglobulin and Tcell receptor variable domains and Ig superfamily V-like domains" Dev. Comp. Immunol., 27, 55-77 (2003).
[4] Lefranc M.-P. et al. "IMGT unique numbering for immunoglobulin and T cell receptor constant domains and Ig superfamily C-like domains" Dev. Comp. Immunol., 2005, 29, 185-203 PMID: 15572068