"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene, when the data have been confirmed by several studies.
Functionality is shown in parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
IMGT allele confirmation: A scoring system is employed to indicate the number of IMGT/LIGM-DB reference sequences and other sequences from the literature in which an IG or TR gene allele has been identified and annotated.
| IMGT subgroup | IMGT gene name | IMGT allele name | Score for IMGT allele confirmation | Fct | Chromosomosal localization | R T Pr | IMGT/LIGM-DB reference sequences | IMGT/LIGM-DB sequences from the literature | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Clone names | Isolate | Accession numbers | Positions in the sequence (L-V-GENE-UNIT) or V-REGION (*) | Secondary accession numbers | Clone names | Isolate | Accession numbers | Positions in the sequence (L-V-GENE-UNIT) or V-REGION (*) | |||||||
| IGHV(I) | IGHV(I)-29 | IGHV(I)-29*01 | P (1) | 14 | Susie | BK075454✤ [1,4] MAP | 811339->811492 * | ||||||||
| IGHV(I) | IGHV(I)-29 | IGHV(I)-29*02 | P (1) | 14 | AG06213 | BK075455✤ [1,4] | 859752-859905 * | AG06213 | BK075456✤ [1,4] | 965751->965904 * | |||||
| AG06213 | IMGT000156 [2] | 915113->915266 * | |||||||||||||
| IGHV(II) | IGHV(II)-1 | IGHV(II)-1*01 | P (2) | 14 | Susie | BK075454✤ [1,4] MAP | <1079821-1080053 * | AG06213 | BK075456✤ [1,4] | <1240635-1240869 * | |||||
| AG06213 | IMGT000156 [2] | <1189997-1190231 * | |||||||||||||
| IGHV(II) | IGHV(II)-1 | IGHV(II)-1*02 | P (2) | 14 | AG06213 | BK075455✤ [1,4] | <1134788-1135020 * | ||||||||
| IGHV(II) | IGHV(II)-2 | IGHV(II)-2*01 | P (2) | 14 | Susie | BK075454✤ [1,4] MAP | complement(1035893->1036196) * | AG06213 | BK075455✤ [1,4] | complement(<1090805-1091108) * | |||||
| AG06213 | IMGT000155 [3] | complement(<1040168-1040471) * | |||||||||||||
| IGHV(II) | IGHV(II)-2 | IGHV(II)-2*02 | P (2) | 14 | AG06213 | BK075456✤ [1,4] | complement(<1196700-1197003) * | ||||||||
| IGHV(II) | IGHV(II)-3 | IGHV(II)-3*01 | P (3) | 14 | Susie | BK075454✤ [1,4] MAP | complement(<1025686-1025951) * | ||||||||
| IGHV(II) | IGHV(II)-3 | IGHV(II)-3*02 | P (3) | 14 | AG06213 | BK075455✤ [1,4] | complement(1080569->1080840) * | ||||||||
| IGHV(II) | IGHV(II)-3 | IGHV(II)-3*03 | P (3) | 14 | AG06213 | BK075456✤ [1,4] | complement(1186495->1186760) * | ||||||||
| IGHV(II) | IGHV(II)-14 | IGHV(II)-14*01 | P (2) | 14 | Susie | BK075454✤ [1,4] MAP | <921542-921823 * | ||||||||
| IGHV(II) | IGHV(II)-14 | IGHV(II)-14*02 | P (2) | 14 | AG06213 | BK075455✤ [1,4] | 976140-976421 * | AG06213 | BK075456✤ [1,4] | <1082123-1082404 * | |||||
| AG06213 | IMGT000156 [2] | <1031485-1031766 * | |||||||||||||
| IGHV(II) | IGHV(II)-20 | IGHV(II)-20*01 | P (2) | 14 | Susie | BK075454✤ [1,4] MAP | <887701-887963 * | ||||||||
| IGHV(II) | IGHV(II)-20 | IGHV(II)-20*02 | P (2) | 14 | AG06213 | BK075455✤ [1,4] | 942300-942562 * | ||||||||
| IGHV(II) | IGHV(II)-20 | IGHV(II)-20*03 | P (2) | 14 | AG06213 | BK075456✤ [1,4] | <1048286-1048548 * | ||||||||
| IGHV(II) | IGHV(II)-24 | IGHV(II)-24*01 | P (2) | 14 | Susie | BK075454✤ [1,4] MAP | <849853-850156 * | AG06213 | BK075455✤ [1,4] | 904482-904785 * | |||||
| AG06213 | BK075456✤ [1,4] | <1010467-1010770 * | |||||||||||||
| AG06213 | IMGT000155 [3] | <853845-854148 * | |||||||||||||
| AG06213 | IMGT000156 [2] | <959829-960132 * | |||||||||||||
| IGHV(II) | IGHV(II)-28 | IGHV(II)-28*01 | P (4) | 14 | Susie | BK075454✤ [1,4] MAP | <815159->815365 * | ||||||||
| IGHV(II) | IGHV(II)-28 | IGHV(II)-28*02 | P (4) | 14 | AG06213 | BK075455✤ [1,4] | 863575-863781 * | AG06213 | BK075456✤ [1,4] | <969571->969777 * | |||||
| AG06213 | IMGT000156 [2] | <918933->919139 * | |||||||||||||
| IGHV(II) | IGHV(II)-30 | IGHV(II)-30*01 | P (4) | 14 | Susie | BK075454✤ [1,4] MAP | <806662->806803 * | AG06213 | BK075455✤ [1,4] | 855075-855216 * | |||||
| AG06213 | BK075456✤ [1,4] | <961074->961215 * | |||||||||||||
| AG06213 | IMGT000155 [3] | <804438->804579 * | |||||||||||||
| AG06213 | IMGT000156 [2] | <910436->910577 * | |||||||||||||
| IGHV(II) | IGHV(II)-35 | IGHV(II)-35*01 | P (2) | 14 | Susie | BK075454✤ [1,4] MAP | <766496-766766 * | AG06213 | BK075455✤ [1,4] | 814920-815190 * | |||||
| AG06213 | IMGT000155 [3] | <764283-764553 * | |||||||||||||
| IGHV(II) | IGHV(II)-35 | IGHV(II)-35*02 | P (2) | 14 | AG06213 | BK075456✤ [1,4] | <920896-921166 * | ||||||||
| IGHV(II) | IGHV(II)-41 | IGHV(II)-41*01 | P (5) | 14 | Susie | BK075454✤ [1,4] MAP | 723712-724389 | AG06213 | BK075455✤ [1,4] | 772060-772737 | |||||
| AG06213 | BK075456✤ [1,4] | 878131-878808 | |||||||||||||
| AG06213 | IMGT000155 [3] | 721423-722100 | |||||||||||||
| AG06213 | IMGT000156 [2] | 827493-828170 | |||||||||||||
| IGHV(II) | IGHV(II)-51 | IGHV(II)-51*01 | P (4) | 14 | Susie | BK075454✤ [1,4] MAP | <666201->666377 * | AG06213 | BK075455✤ [1,4] | 714566-714742 * | |||||
| AG06213 | BK075456✤ [1,4] | <820639->820815 * | |||||||||||||
| AG06213 | IMGT000155 [3] | <663929->664105 * | |||||||||||||
| AG06213 | IMGT000156 [2] | <770001->770177 * | |||||||||||||
| IGHV(II) | IGHV(II)-56 | IGHV(II)-56*01 | P (2) | 14 | Susie | BK075454✤ [1,4] MAP | <633532-633807 * | ||||||||
| IGHV(II) | IGHV(II)-56 | IGHV(II)-56*02 | P (2) | 14 | AG06213 | BK075455✤ [1,4] | 681922-682197 * | ||||||||
| IGHV(II) | IGHV(II)-56 | IGHV(II)-56*03 | P (2) | 14 | AG06213 | BK075456✤ [1,4] | <787936-788211 * | ||||||||
| IGHV(II) | IGHV(II)-59 | IGHV(II)-59*01 | P (6) | 14 | Susie | BK075454✤ [1,4] MAP | 618675-619344 | AG06213 | BK075456✤ [1,4] | 773051-773720 | |||||
| AG06213 | IMGT000156 [2] | 722413-723082 | |||||||||||||
| IGHV(II) | IGHV(II)-59 | IGHV(II)-59*02 | P (6) | 14 | AG06213 | BK075455✤ [1,4] | 667095-667764 | ||||||||
| IGHV(II) | IGHV(II)-71 | IGHV(II)-71*01 | P (2) | 14 | Susie | BK075454✤ [1,4] MAP | <530406-530603 * | AG06213 | BK075455✤ [1,4] | 576474-576671 * | |||||
| AG06213 | BK075456✤ [1,4] | <684684-684881 * | |||||||||||||
| AG06213 | IMGT000155 [3] | <525837-526034 * | |||||||||||||
| AG06213 | IMGT000156 [2] | <634046-634243 * | |||||||||||||
| IGHV(II) | IGHV(II)-75 | IGHV(II)-75*01 | P (4) | 14 | Susie | BK075454✤ [1,4] MAP | <498145->498355 * | AG06213 | BK075455✤ [1,4] | 544201-544411 * | |||||
| AG06213 | BK075456✤ [1,4] | <652431->652641 * | |||||||||||||
| AG06213 | IMGT000155 [3] | <493564->493774 * | |||||||||||||
| AG06213 | IMGT000156 [2] | <601793->602003 * | |||||||||||||
| IGHV(II) | IGHV(II)-78 | IGHV(II)-78*01 | P (2) | 14 | Susie | BK075454✤ [1,4] MAP | <476668-476904 * | AG06213 | BK075455✤ [1,4] | 522734-522970 * | |||||
| AG06213 | BK075456✤ [1,4] | <630963-631199 * | |||||||||||||
| AG06213 | IMGT000155 [3] | <472097-472333 * | |||||||||||||
| AG06213 | IMGT000156 [2] | <580325-580561 * | |||||||||||||
| IGHV(II) | IGHV(II)-81 | IGHV(II)-81*01 | P (4) | 14 | Susie | BK075454✤ [1,4] MAP | <455189->455372 * | AG06213 | BK075455✤ [1,4] | 501252-501435 * | |||||
| AG06213 | BK075456✤ [1,4] | <609487->609670 * | |||||||||||||
| AG06213 | IMGT000155 [3] | <450615->450798 * | |||||||||||||
| AG06213 | IMGT000156 [2] | <558849->559032 * | |||||||||||||
| IGHV(II) | IGHV(II)-86 | IGHV(II)-86*01 | P (7) | 14 | Susie | BK075454✤ [1,4] MAP | 404523-405201 | ||||||||
| IGHV(II) | IGHV(II)-86 | IGHV(II)-86*02 | P (7) | 14 | AG06213 | BK075455✤ [1,4] | 444676-445354 | ||||||||
| IGHV(II) | IGHV(II)-86 | IGHV(II)-86*03 | P (7) | 14 | AG06213 | BK075456✤ [1,4] | 558822-559500 | ||||||||
| IGHV(II) | IGHV(II)-90 | IGHV(II)-90*01 | P (2) | 14 | Susie | BK075454✤ [1,4] MAP | <383565-383827 * | ||||||||
| IGHV(II) | IGHV(II)-90 | IGHV(II)-90*02 | P (2) | 14 | AG06213 | BK075455✤ [1,4] | 423721-423983 * | AG06213 | BK075456✤ [1,4] | <537865-538127 * | |||||
| AG06213 | IMGT000156 [2] | <487227-487489 * | |||||||||||||
| IGHV(II) | IGHV(II)-93 | IGHV(II)-93*01 | P (8) | 14 | Susie | BK075454✤ [1,4] MAP | 365110-365775 | AG06213 | BK075455✤ [1,4] | 405207-405872 | |||||
| AG06213 | IMGT000155 [3] | 354570-355235 | |||||||||||||
| IGHV(II) | IGHV(II)-93 | IGHV(II)-93*02 | P (8) | 14 | AG06213 | BK075456✤ [1,4] | 519304-519969 | ||||||||
| IGHV(II) | IGHV(II)-111 | IGHV(II)-111*01 | P (6) | 14 | Susie | BK075454✤ [1,4] MAP | 278692-279366 | AG06213 | BK075455✤ [1,4] | 294545-295219 | |||||
| AG06213 | IMGT000155 [3] | 243908-244582 | |||||||||||||
| IGHV(II) | IGHV(II)-111 | IGHV(II)-111*02 | P (6) | 14 | AG06213 | BK075456✤ [1,4] | 408674-409348 | ||||||||
| IGHV(II) | IGHV(II)-114 | IGHV(II)-114*01 | P (9) | 14 | Susie | BK075454✤ [1,4] MAP | 262359-263023 | ||||||||
| IGHV(II) | IGHV(II)-114 | IGHV(II)-114*02 | P (9) | 14 | AG06213 | BK075455✤ [1,4] | 278207-278871 | ||||||||
| IGHV(II) | IGHV(II)-114 | IGHV(II)-114*03 | P (9) | 14 | AG06213 | BK075456✤ [1,4] | <393114-393384 * | ||||||||
| IGHV(II) | IGHV(II)-115-5 | IGHV(II)-115-5*01 | P (7) | 15 | AG06213 | BK075456✤ [1,4] MAP | 363854-364534 | ||||||||
| IGHV(II) | IGHV(II)-115-7 | IGHV(II)-115-7*01 | P (3) | 15 | AG06213 | BK075456✤ [1,4] MAP | 334672->334854 * | ||||||||
| IGHV(II) | IGHV(II)-115-10 | IGHV(II)-115-10*01 | P (2) | 15 | AG06213 | BK075456✤ [1,4] MAP | <318426-318726 * | ||||||||
| IGHV(II) | IGHV(II)-115-13 | IGHV(II)-115-13*01 | P (3) | 15 | AG06213 | BK075456✤ [1,4] MAP | 298623->298761 * | ||||||||
| IGHV(II) | IGHV(II)-130 | IGHV(II)-130*01 | P (10) | 14 | Susie | BK075454✤ [1,4] MAP | 89708-91382 | ||||||||
| IGHV(II) | IGHV(II)-130 | IGHV(II)-130*02 | P (10) | 14 | AG06213 | BK075455✤ [1,4] | 138647-140321 | AG06213 | BK075456✤ [1,4] | 138758-140432 | |||||
| AG06213 | IMGT000156 [2] | 88120-89794 | |||||||||||||
| IGHV(II) | IGHV(II)-136 | IGHV(II)-136*01 | P (3) | 14 | Susie | BK075454✤ [1,4] MAP | 23335->23517 * | AG06213 | BK075455✤ [1,4] | 73495-73677 * | |||||
| AG06213 | BK075456✤ [1,4] | 73611->73793 * | |||||||||||||
| AG06213 | IMGT000155 [3] | 22858->23040 * | |||||||||||||
| AG06213 | IMGT000156 [2] | 22973->23155 * | |||||||||||||
| IGHV(II) | IGHV(II)-141 | IGHV(II)-141*01 | P (8) | 15 | AG06213 | BK075455✤ [1,4] MAP | 29071-29745 | AG06213 | BK075456✤ [1,4] | 29072-29746 | |||||
| IGHV(III) | IGHV(III)-5 | IGHV(III)-5*01 | P (11) | 14 | Susie | BK075454✤ [1,4] MAP | 996787-997249 | ||||||||
| IGHV(III) | IGHV(III)-5 | IGHV(III)-5*02 | P (11) | 14 | AG06213 | BK075455✤ [1,4] | 1051532-1051994 | AG06213 | BK075456✤ [1,4] | 1157498-1157960 | |||||
| AG06213 | IMGT000156 [2] | 1106860-1107322 | |||||||||||||
| IGHV(III) | IGHV(III)-9 | IGHV(III)-9*01 | P (4) | 14 | Susie | BK075454✤ [1,4] MAP | <968195->968293 * | ||||||||
| IGHV(III) | IGHV(III)-9 | IGHV(III)-9*02 | P (4) | 14 | AG06213 | BK075455✤ [1,4] | 1022790-1022888 * | AG06213 | BK075456✤ [1,4] | <1128767->1128865 * | |||||
| AG06213 | IMGT000156 [2] | <1078129->1078227 * | |||||||||||||
| IGHV(III) | IGHV(III)-10 | IGHV(III)-10*01 | P (2) | 14 | Susie | BK075454✤ [1,4] MAP | <962113-962373 * | AG06213 | BK075455✤ [1,4] | 1016707-1016967 * | |||||
| AG06213 | IMGT000155 [3] | <966070-966330 * | |||||||||||||
| IGHV(III) | IGHV(III)-10 | IGHV(III)-10*02 | P (2) | 14 | AG06213 | BK075456✤ [1,4] | <1122684-1122944 * | ||||||||
| IGHV(III) | IGHV(III)-17 | IGHV(III)-17*01 | P (2) | 15 | Susie | BK075454✤ [1,4] MAP | <907583-907831 * | AG06213 | BK075455✤ [1,4] | 962181-962429 * | |||||
| AG06213 | BK075456✤ [1,4] | <1068164-1068412 * | |||||||||||||
| AG06213 | IMGT000155 [3] | <911544-911792 * | |||||||||||||
| AG06213 | IMGT000156 [2] | <1017526-1017774 * | |||||||||||||
| IGHV(III) | IGHV(III)-32 | IGHV(III)-32*01 | P (12) | 14 | Susie | BK075454✤ [1,4] MAP | 790708-791171 | ||||||||
| IGHV(III) | IGHV(III)-32 | IGHV(III)-32*02 | P (13) | 14 | AG06213 | BK075455✤ [1,4] | 839118-839581 | ||||||||
| IGHV(III) | IGHV(III)-32 | IGHV(III)-32*03 | P (13) | 14 | AG06213 | BK075456✤ [1,4] | 945116-945579 | ||||||||
| IGHV(III) | IGHV(III)-37 | IGHV(III)-37*01 | P (14) | 14 | Susie | BK075454✤ [1,4] MAP | 758931-759400 | AG06213 | BK075456✤ [1,4] | 913326-913795 | |||||
| AG06213 | IMGT000156 [2] | 862688-863157 | |||||||||||||
| IGHV(III) | IGHV(III)-37 | IGHV(III)-37*02 | P (15) | 14 | AG06213 | BK075455✤ [1,4] | 807255-807724 | ||||||||
| IGHV(III) | IGHV(III)-42 | IGHV(III)-42*01 | P (16) | 14 | Susie | BK075454✤ [1,4] MAP | 722994->723023 * | ||||||||
| IGHV(III) | IGHV(III)-42 | IGHV(III)-42*02 | P (1) | 14 | AG06213 | BK075455✤ [1,4] | 771342->771371 * | AG06213 | BK075456✤ [1,4] | 877413->877442 * | |||||
| AG06213 | IMGT000156 [2] | 826775->826804 * | |||||||||||||
| IGHV(III) | IGHV(III)-46 | IGHV(III)-46*01 | P (17) | 14 | Susie | BK075454✤ [1,4] MAP | 694897-695173 * | ||||||||
| IGHV(III) | IGHV(III)-46 | IGHV(III)-46*02 | P (17) | 14 | AG06213 | BK075455✤ [1,4] | 743269-743545 * | AG06213 | BK075456✤ [1,4] | 849339-849615 * | |||||
| AG06213 | IMGT000156 [2] | 798701-798977 * | |||||||||||||
| IGHV(III) | IGHV(III)-53 | IGHV(III)-53*01 | P (18) | 14 | Susie | BK075454✤ [1,4] MAP | 655587-656039 | AG06213 | BK075455✤ [1,4] | 703963-704415 | |||||
| AG06213 | IMGT000155 [3] | 653326-653778 | |||||||||||||
| IGHV(III) | IGHV(III)-53 | IGHV(III)-53*02 | P (18) | 14 | AG06213 | BK075456✤ [1,4] | 810041-810493 | ||||||||
| IGHV(III) | IGHV(III)-67 | IGHV(III)-67*01 | P (19) | 14 | Susie | BK075454✤ [1,4] MAP | 560034-560487 | AG06213 | BK075455✤ [1,4] | 608280-608733 | |||||
| AG06213 | BK075456✤ [1,4] | 714317-714770 | |||||||||||||
| AG06213 | IMGT000155 [3] | 557643-558096 | |||||||||||||
| AG06213 | IMGT000156 [2] | 663679-664132 | |||||||||||||
| IGHV(III) | IGHV(III)-76 | IGHV(III)-76*01 | P (1) | 14 | Susie | BK075454✤ [1,4] MAP | 492833->492853 * | AG06213 | BK075455✤ [1,4] | 538890-538910 * | |||||
| AG06213 | BK075456✤ [1,4] | 647120-647140 * | |||||||||||||
| AG06213 | IMGT000155 [3] | 488253->488273 * | |||||||||||||
| AG06213 | IMGT000156 [2] | 596482-596502 * | |||||||||||||
| IGHV(III) | IGHV(III)-83 | IGHV(III)-83*01 | P (20) | 14 | Susie | BK075454✤ [1,4] MAP | 439740-440032 * | AG06213 | BK075456✤ [1,4] | 594038-594330 * | |||||
| AG06213 | IMGT000156 [2] | 543400-543692 * | |||||||||||||
| IGHV(III) | IGHV(III)-83 | IGHV(III)-83*02 | P (20) | 14 | AG06213 | BK075455✤ [1,4] | 485778-486070 * | ||||||||
| IGHV(III) | IGHV(III)-97 | IGHV(III)-97*01 | P (21) | 14 | Susie | BK075454✤ [1,4] MAP | 346442-346904 | ||||||||
| IGHV(III) | IGHV(III)-97 | IGHV(III)-97*02 | P (22) | 14 | AG06213 | BK075455✤ [1,4] | 386487-386953 | AG06213 | BK075456✤ [1,4] | 500617-501083 | |||||
| AG06213 | IMGT000156 [2] | 449979-450445 | |||||||||||||
| IGHV(III) | IGHV(III)-107 | IGHV(III)-107*01 | P (12) | 14 | Susie | BK075454✤ [1,4] MAP | 297599-298062 | AG06213 | BK075455✤ [1,4] | 313452-313915 | |||||
| AG06213 | IMGT000155 [3] | 262815-263278 | |||||||||||||
| IGHV(III) | IGHV(III)-107 | IGHV(III)-107*02 | P (12) | 14 | AG06213 | BK075456✤ [1,4] | 427634-428095 | ||||||||
| IGHV(III) | IGHV(III)-115-2 | IGHV(III)-115-2*01 | P (4) | 15 | AG06213 | BK075456✤ [1,4] MAP | <383505->383603 * | ||||||||
| IGHV(III) | IGHV(III)-115-14 | IGHV(III)-115-14*01 | P (2) | 15 | AG06213 | BK075456✤ [1,4] MAP | <297950-298048 * | ||||||||
| IGHV(III) | IGHV(III)-115-15 | IGHV(III)-115-15*01 | P (2) | 15 | AG06213 | BK075456✤ [1,4] MAP | <292028-292302 * | ||||||||
| IGHV(III) | IGHV(III)-115-16 | IGHV(III)-115-16*01 | P (12) | 15 | AG06213 | BK075456✤ [1,4] MAP | 289430-289898 | ||||||||
| IGHV(III) | IGHV(III)-139 | IGHV(III)-139*01 | P (2) | 14 | Susie | BK075454✤ [1,4] | <10632-10917 * | ||||||||
| IGHV(III) | IGHV(III)-139 | IGHV(III)-139*02 | P (2) | 14 | AG06213 | BK075455✤ [1,4] | 60638-60923 * | AG06213 | BK075456✤ [1,4] | <60639-60924 * | |||||
| IGHV(III) | IGHV(III)-145 | IGHV(III)-145*01 | P (9) | 15 | AG06213 | BK075455✤ [1,4] MAP | 9875-10332 | AG06213 | BK075456✤ [1,4] | 9875-10332 | |||||
| IGHV(IV) | IGHV(IV)-77 | IGHV(IV)-77*01 | P (21) | 14 | Susie | BK075454✤ [1,4] MAP | 481304-481772 | AG06213 | BK075455✤ [1,4] | 527370-527838 | |||||
| AG06213 | BK075456✤ [1,4] | 635599-636067 | |||||||||||||
| AG06213 | IMGT000155 [3] | 476733-477201 | |||||||||||||
| AG06213 | IMGT000156 [2] | 584961-585429 | |||||||||||||
✤ : NCBI accession number that correspond to a previously internal IMGT accession number. See the correspondence table.