Citing IMGT databases: Manso T. et al. IMGT® databases, related tools and web resources through three main axes of research and development. Nucleic Acids Res. 2022 Jan 7;50(D1):D1262-D1272. doi: 10.1093/nar/gkab1136 PMID: 34875068 Free PMC article.
Program version: v. 

Addition of 'Score for IMGT allele confirmation' as well as NCBI TPA accession numbers.
September 20th, 2023.

Implementation of the dynamic gene table.

Gene table legend:

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene, when the data have been confirmed by several studies.

Functionality is shown in parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.

In the realm of IMGT allele confirmation, a scoring system is employed to signify the frequency of occurrences of a specific allele within sequence data. A single star (*) indicates that no instances of the allele have been identified in the literature. Two stars (**) indicate the discovery of one literature sequence containing the allele. If more than one literature sequence is found to contain the allele, it is designated with three stars (***). In the Excel file, the stars are represented by the plus symbol (+).

Click on:
  • IMGT gene name to get the corresponding IMGT/GENE-DB entry (link).
  • IMGT allele name to see the corresponding Alignments of alleles (link).
  • Accession number to get the corresponding IMGT/LIGM-DB entry (link).
  • MAP: mapped sequences. Click to access GENE-DB «LOCALIZATION IN GENOME ASSEMBLIES» (link).
  • [number] to access the corresponding IMGT reference (popover).
  • (number) to see the corresponding IMGT note (popover).
Options:
  • You can show/hide columns (), download data () or put the table in fullscreen () using buttons.
See also (IMGT Scientific chart):
Select a species and a IMGT group to get the gene table:
Only IMGT available species/group are shown in the drop-down list.
The gene table can take several seconds to appear, please be patient.
Gene table of Western lowland gorilla (Gorilla gorilla gorilla) TRAJ IMGT group:
IMGT gene nameIMGT allele nameFctScore for
IMGT allele
confirmation		Chromosomosal
localization		R T PrIMGT/LIGM-DB reference sequencesIMGT/LIGM-DB sequences from the literature
IsolateClone namesAccession
numbers		Positions
in the sequence
(J-GENE-UNIT)
or J-REGION (*)		Secondary
accession
numbers		IsolateClone namesAccession
numbers		Positions
in the sequence
(J-GENE-UNIT)
or J-REGION (*)
TRAJ1 TRAJ1*01 ORF (1) 14 Kamilah CM017861.1 BK064837✤ [1] MAP 942448-942535 KB3781 CM054596.1 BK064839✤ [1] 944640-944727
KB3781 CM054572.1 BK064840✤ [1] 948236-948323
Susie3 LT578329.1 BK064838✤ [1] 959301-959388
TRAJ2 TRAJ2*01 ORF (2) 14 Kamilah CM017861.1 BK064837✤ [1] MAP 941480-941573 KB3781 CM054596.1 BK064839✤ [1] 943674-943767
KB3781 CM054572.1 BK064840✤ [1] 947270-947363
Susie3 LT578329.1 BK064838✤ [1] 958335-958428
TRAJ3 TRAJ3*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 940574-940663 KB3781 CM054596.1 BK064839✤ [1] 942778-942867
KB3781 CM054572.1 BK064840✤ [1] 946374-946463
Susie3 LT578329.1 BK064838✤ [1] 957439-957528
TRAJ4 TRAJ4*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 939594-939684 KB3781 CM054596.1 BK064839✤ [1] 941798-941888
KB3781 CM054572.1 BK064840✤ [1] 945394-945484
Susie3 LT578329.1 BK064838✤ [1] 956460-956550
TRAJ5 TRAJ5*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 937646-937733 KB3781 CM054596.1 BK064839✤ [1] 939848-939935
KB3781 CM054572.1 BK064840✤ [1] 943444-943531
Susie3 LT578329.1 BK064838✤ [1] 954512-954599
TRAJ6 TRAJ6*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 936472-936561 KB3781 CM054596.1 BK064839✤ [1] 938674-938763
KB3781 CM054572.1 BK064840✤ [1] 942270-942359
Susie3 LT578329.1 BK064838✤ [1] 953338-953427
TRAJ7 TRAJ7*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 935024-935108 KB3781 CM054596.1 BK064839✤ [1] 937226-937310
KB3781 CM054572.1 BK064840✤ [1] 940821-940905
Susie3 LT578329.1 BK064838✤ [1] 951890-951974
TRAJ8 TRAJ8*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 933548-933635 KB3781 CM054596.1 BK064839✤ [1] 935750-935837
Susie3 LT578329.1 BK064838✤ [1] 950414-950501
TRAJ8 TRAJ8*02 F 14 KB3781 CM054572.1 BK064840✤ [1] MAP 939345-939432
TRAJ9 TRAJ9*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 932956-933044 KB3781 CM054596.1 BK064839✤ [1] 935158-935246
KB3781 CM054572.1 BK064840✤ [1] 938753-938841
Susie3 LT578329.1 BK064838✤ [1] 949822-949910
TRAJ10 TRAJ10*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 930902-930993 KB3781 CM054596.1 BK064839✤ [1] 933097-933188
KB3781 CM054572.1 BK064840✤ [1] 936692-936783
Susie3 LT578329.1 BK064838✤ [1] 947756-947847
TRAJ11 TRAJ11*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 929907-929994 KB3781 CM054596.1 BK064839✤ [1] 932102-932189
KB3781 CM054572.1 BK064840✤ [1] 935697-935784
Susie3 LT578329.1 BK064838✤ [1] 946761-946848
TRAJ12 TRAJ12*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 929344-929431 KB3781 CM054596.1 BK064839✤ [1] 931539-931626
KB3781 CM054572.1 BK064840✤ [1] 935134-935221
Susie3 LT578329.1 BK064838✤ [1] 946198-946285
TRAJ13 TRAJ13*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 928481-928571 KB3781 CM054596.1 BK064839✤ [1] 930676-930766
KB3781 CM054572.1 BK064840✤ [1] 934271-934361
Susie3 LT578329.1 BK064838✤ [1] 945335-945425
TRAJ14 TRAJ14*01 ORF (3) 14 Kamilah CM017861.1 BK064837✤ [1] MAP 927732-927811 KB3781 CM054596.1 BK064839✤ [1] 929927-930006
KB3781 CM054572.1 BK064840✤ [1] 933522-933601
Susie3 LT578329.1 BK064838✤ [1] 944586-944665
TRAJ15 TRAJ15*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 927034-927121 KB3781 CM054596.1 BK064839✤ [1] 929229-929316
KB3781 CM054572.1 BK064840✤ [1] 932824-932911
Susie3 LT578329.1 BK064838✤ [1] 943888-943975
TRAJ16 TRAJ16*01 ORF (4) 14 Kamilah CM017861.1 BK064837✤ [1] MAP 925941-926028 KB3781 CM054596.1 BK064839✤ [1] 928136-928223
KB3781 CM054572.1 BK064840✤ [1] 931731-931818
Susie3 LT578329.1 BK064838✤ [1] 942795-942882
TRAJ17 TRAJ17*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 924573-924663 KB3781 CM054596.1 BK064839✤ [1] 926768-926858
KB3781 CM054572.1 BK064840✤ [1] 930363-930453
Susie3 LT578329.1 BK064838✤ [1] 941427-941517
TRAJ18 TRAJ18*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 923379-923472 KB3781 CM054596.1 BK064839✤ [1] 925574-925667
KB3781 CM054572.1 BK064840✤ [1] 929169-929262
Susie3 LT578329.1 BK064838✤ [1] 940233-940326
TRAJ19 TRAJ19*01 ORF (5) 14 Kamilah CM017861.1 BK064837✤ [1] MAP 922989-923079 KB3781 CM054596.1 BK064839✤ [1] 925184-925274
KB3781 CM054572.1 BK064840✤ [1] 928779-928869
Susie3 LT578329.1 BK064838✤ [1] 939843-939933
TRAJ20 TRAJ20*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 922054-922138 KB3781 CM054596.1 BK064839✤ [1] 924249-924333
Susie3 LT578329.1 BK064838✤ [1] 938908-938992
TRAJ20 TRAJ20*02 F 14 KB3781 CM054572.1 BK064840✤ [1] MAP 927844-927928
TRAJ21 TRAJ21*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 921330-921412 KB3781 CM054596.1 BK064839✤ [1] 923525-923607
KB3781 CM054572.1 BK064840✤ [1] 927120-927202
Susie3 LT578329.1 BK064838✤ [1] 938184-938266
TRAJ22 TRAJ22*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 919765-919855 KB3781 CM054596.1 BK064839✤ [1] 921966-922056
KB3781 CM054572.1 BK064840✤ [1] 925558-925648
Susie3 LT578329.1 BK064838✤ [1] 936624-936714
TRAJ23 TRAJ23*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 918141-918231 KB3781 CM054596.1 BK064839✤ [1] 920342-920432
KB3781 CM054572.1 BK064840✤ [1] 923934-924024
Susie3 LT578329.1 BK064838✤ [1] 935001-935091
TRAJ24 TRAJ24*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 917694-917784 KB3781 CM054596.1 BK064839✤ [1] 919895-919985
KB3781 CM054572.1 BK064840✤ [1] 923487-923577
Susie3 LT578329.1 BK064838✤ [1] 934554-934644
TRAJ25 TRAJ25*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 916537-916624 KB3781 CM054596.1 BK064839✤ [1] 918738-918825
KB3781 CM054572.1 BK064840✤ [1] 922330-922417
Susie3 LT578329.1 BK064838✤ [1] 933398-933485
TRAJ26 TRAJ26*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 916171-916258 KB3781 CM054596.1 BK064839✤ [1] 918372-918459
TRAJ26 TRAJ26*02 P (6) 14 Susie3 LT578329.1 BK064838✤ [1] MAP 933033-933119
TRAJ26 TRAJ26*03 ORF (3) 14 KB3781 CM054572.1 BK064840✤ [1] MAP 921964-922051
TRAJ27 TRAJ27*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 913999-914085 KB3781 CM054596.1 BK064839✤ [1] 916200-916286
Susie3 LT578329.1 BK064838✤ [1] 930862-930948
TRAJ27 TRAJ27*02 F 14 KB3781 CM054572.1 BK064840✤ [1] MAP 919796-919882
TRAJ28 TRAJ28*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 913349-913442 KB3781 CM054596.1 BK064839✤ [1] 915550-915643
Susie3 LT578329.1 BK064838✤ [1] 930212-930305
TRAJ28 TRAJ28*02 F 14 KB3781 CM054572.1 BK064840✤ [1] MAP 919152-919245
TRAJ29 TRAJ29*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 911667-911754 KB3781 CM054596.1 BK064839✤ [1] 913869-913956
KB3781 CM054572.1 BK064840✤ [1] 917481-917568
Susie3 LT578329.1 BK064838✤ [1] 928532-928619
TRAJ30 TRAJ30*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 910585-910669 KB3781 CM054596.1 BK064839✤ [1] 912788-912872
Susie3 LT578329.1 BK064838✤ [1] 927452-927536
TRAJ30 TRAJ30*02 F 14 KB3781 CM054572.1 BK064840✤ [1] MAP 916400-916484
TRAJ31 TRAJ31*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 908698-908782 KB3781 CM054596.1 BK064839✤ [1] 910901-910985
KB3781 CM054572.1 BK064840✤ [1] 914512-914596
Susie3 LT578329.1 BK064838✤ [1] 925566-925650
TRAJ32 TRAJ32*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 907092-907185 KB3781 CM054596.1 BK064839✤ [1] 909295-909388
KB3781 CM054572.1 BK064840✤ [1] 912904-912997
Susie3 LT578329.1 BK064838✤ [1] 923960-924053
TRAJ33 TRAJ33*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 906357-906441 KB3781 CM054596.1 BK064839✤ [1] 908560-908644
KB3781 CM054572.1 BK064840✤ [1] 912169-912253
Susie3 LT578329.1 BK064838✤ [1] 923226-923310
TRAJ34 TRAJ34*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 905433-905518 KB3781 CM054596.1 BK064839✤ [1] 907636-907721
Susie3 LT578329.1 BK064838✤ [1] 922302-922387
TRAJ34 TRAJ34*02 F 14 KB3781 CM054572.1 BK064840✤ [1] MAP 911235-911320
TRAJ35 TRAJ35*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 904401-904487 KB3781 CM054596.1 BK064839✤ [1] 906592-906678
KB3781 CM054572.1 BK064840✤ [1] 910207-910293
Susie3 LT578329.1 BK064838✤ [1] 921262-921348
TRAJ36 TRAJ36*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 902868-902954 KB3781 CM054596.1 BK064839✤ [1] 905061-905147
KB3781 CM054572.1 BK064840✤ [1] 908674-908760
Susie3 LT578329.1 BK064838✤ [1] 919732-919818
TRAJ37 TRAJ37*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 901507-901596 KB3781 CM054596.1 BK064839✤ [1] 903700-903789
KB3781 CM054572.1 BK064840✤ [1] 907313-907402
Susie3 LT578329.1 BK064838✤ [1] 918371-918460
TRAJ38 TRAJ38*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 899987-900076 KB3781 CM054596.1 BK064839✤ [1] 902179-902268
Susie3 LT578329.1 BK064838✤ [1] 916850-916939
TRAJ38 TRAJ38*02 F 14 KB3781 CM054572.1 BK064840✤ [1] MAP 905793-905882
TRAJ39 TRAJ39*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 899357-899447 KB3781 CM054596.1 BK064839✤ [1] 901551-901641
KB3781 CM054572.1 BK064840✤ [1] 905163-905253
Susie3 LT578329.1 BK064838✤ [1] 916220-916310
TRAJ40 TRAJ40*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 897444-897532 KB3781 CM054596.1 BK064839✤ [1] 899638-899726
Susie3 LT578329.1 BK064838✤ [1] 914308-914396
TRAJ40 TRAJ40*02 F 14 KB3781 CM054572.1 BK064840✤ [1] MAP 903250-903338
TRAJ41 TRAJ41*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 895412-895501 KB3781 CM054596.1 BK064839✤ [1] 897606-897695
TRAJ41 TRAJ41*02 F 14 Susie3 LT578329.1 BK064838✤ [1] MAP 912276-912365
TRAJ41 TRAJ41*03 ORF (7) 14 KB3781 CM054572.1 BK064840✤ [1] MAP 901218-901307
TRAJ42 TRAJ42*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 894642-894735 KB3781 CM054596.1 BK064839✤ [1] 896836-896929
KB3781 CM054572.1 BK064840✤ [1] 900448-900541
Susie3 LT578329.1 BK064838✤ [1] 911506-911599
TRAJ43 TRAJ43*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 893672-893753 KB3781 CM054596.1 BK064839✤ [1] 895867-895948
KB3781 CM054572.1 BK064840✤ [1] 899479-899560
Susie3 LT578329.1 BK064838✤ [1] 910537-910618
TRAJ44 TRAJ44*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 892580-892670 KB3781 CM054572.1 BK064840✤ [1] 898387-898477
TRAJ44 TRAJ44*02 F 14 Susie3 LT578329.1 BK064838✤ [1] MAP 909445-909535 KB3781 CM054596.1 BK064839✤ [1] 894775-894865
TRAJ45 TRAJ45*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 891684-891777 KB3781 CM054596.1 BK064839✤ [1] 893879-893972
KB3781 CM054572.1 BK064840✤ [1] 897491-897584
Susie3 LT578329.1 BK064838✤ [1] 908550-908643
TRAJ46 TRAJ46*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 891162-891252
TRAJ46 TRAJ46*02 P (6) 14 Susie3 LT578329.1 BK064838✤ [1] MAP 908030-908119
TRAJ46 TRAJ46*03 F 14 KB3781 CM054596.1 BK064839✤ [1] MAP 893357-893447
TRAJ46 TRAJ46*04 F 14 KB3781 CM054572.1 BK064840✤ [1] MAP 896969-897059
TRAJ47 TRAJ47*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 890608-890692 KB3781 CM054596.1 BK064839✤ [1] 892804-892888
KB3781 CM054572.1 BK064840✤ [1] 896416-896500
Susie3 LT578329.1 BK064838✤ [1] 907479-907563
TRAJ48 TRAJ48*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 888245-888335 KB3781 CM054596.1 BK064839✤ [1] 890441-890531
KB3781 CM054572.1 BK064840✤ [1] 894061-894151
TRAJ48 TRAJ48*02 F 14 Susie3 LT578329.1 BK064838✤ [1] MAP 905124-905214
TRAJ49 TRAJ49*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 887258-887339 KB3781 CM054596.1 BK064839✤ [1] 889458-889539
KB3781 CM054572.1 BK064840✤ [1] 893071-893152
Susie3 LT578329.1 BK064838✤ [1] 904134-904215
TRAJ50 TRAJ50*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 886376-886463 KB3781 CM054596.1 BK064839✤ [1] 888577-888664
TRAJ50 TRAJ50*02 F 14 Susie3 LT578329.1 BK064838✤ [1] MAP 903253-903340 KB3781 CM054572.1 BK064840✤ [1] 892190-892277
TRAJ51 TRAJ51*01 P (8) 14 Kamilah CM017861.1 BK064837✤ [1] MAP 884966-885056 KB3781 CM054596.1 BK064839✤ [1] 887167-887257
KB3781 CM054572.1 BK064840✤ [1] 890780-890870
TRAJ51 TRAJ51*02 P (8) 14 Susie3 LT578329.1 BK064838✤ [1] MAP 901843-901933
TRAJ52 TRAJ52*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 884010-884106 KB3781 CM054596.1 BK064839✤ [1] 886211-886307
KB3781 CM054572.1 BK064840✤ [1] 889824-889920
Susie3 LT578329.1 BK064838✤ [1] 900902-900998
TRAJ53 TRAJ53*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 880789-880882 KB3781 CM054596.1 BK064839✤ [1] 882990-883083
KB3781 CM054572.1 BK064840✤ [1] 886602-886695
Susie3 LT578329.1 BK064838✤ [1] 897680-897773
TRAJ54 TRAJ54*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 880073-880160 KB3781 CM054596.1 BK064839✤ [1] 882274-882361
KB3781 CM054572.1 BK064840✤ [1] 885886-885973
Susie3 LT578329.1 BK064838✤ [1] 896964-897051
TRAJ55 TRAJ55*01 P (9) 14 Kamilah CM017861.1 BK064837✤ [1] MAP 879483-879567 KB3781 CM054596.1 BK064839✤ [1] 881684-881768
KB3781 CM054572.1 BK064840✤ [1] 885296-885380
Susie3 LT578329.1 BK064838✤ [1] 896374-896458
TRAJ56 TRAJ56*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 877307-877396 KB3781 CM054596.1 BK064839✤ [1] 879508-879597
KB3781 CM054572.1 BK064840✤ [1] 883119-883208
Susie3 LT578329.1 BK064838✤ [1] 894197-894286
TRAJ57 TRAJ57*01 F 14 Kamilah CM017861.1 BK064837✤ [1] MAP 876660-876750 KB3781 CM054596.1 BK064839✤ [1] 878861-878951
Susie3 LT578329.1 BK064838✤ [1] 893550-893640
TRAJ57 TRAJ57*02 F 14 KB3781 CM054572.1 BK064840✤ [1] MAP 882472-882562
TRAJ58 TRAJ58*01 F (10) 14 Kamilah CM017861.1 BK064837✤ [1] MAP 875495-875585 KB3781 CM054596.1 BK064839✤ [1] 877696-877786
KB3781 CM054572.1 BK064840✤ [1] 881307-881397
Susie3 LT578329.1 BK064838✤ [1] 892385-892475
TRAJ59 TRAJ59*01 ORF (11) 14 Kamilah CM017861.1 BK064837✤ [1] MAP 874334-874430 KB3781 CM054596.1 BK064839✤ [1] 876535-876631
KB3781 CM054572.1 BK064840✤ [1] 880146-880242
Susie3 LT578329.1 BK064838✤ [1] 891224-891320
TRAJ60 TRAJ60*01 P (9) 14 Kamilah CM017861.1 BK064837✤ [1] MAP 874097-874180 KB3781 CM054596.1 BK064839✤ [1] 876298-876381
KB3781 CM054572.1 BK064840✤ [1] 879909-879992
Susie3 LT578329.1 BK064838✤ [1] 890987-891070
TRAJ61 TRAJ61*01 ORF (12) 14 Kamilah CM017861.1 BK064837✤ [1] MAP 873108-873195 KB3781 CM054596.1 BK064839✤ [1] 875311-875398
KB3781 CM054572.1 BK064840✤ [1] 878920-879007
Susie3 LT578329.1 BK064838✤ [1] 889998-890085

✤ : NCBI accession number that correspond to a previously internal IMGT accession number. See the correspondence table.

IMGT notes: ↑
  1. noncanonical J-HEPTAMER: gggcatg instead of cactgtg, noncanonical J-NONAMER: attctgtaa instead of ggtttttgt
  2. noncanonical J-HEPTAMER: tacggta instead of cactgtg, noncanonical J-NONAMER: agtttctgc instead of ggtttttgt
  3. noncanonical J-MOTIF: FGXR instead of FGXG
  4. noncanonical J-MOTIF: FAXG instead of FGXG
  5. noncanonical J-HEPTAMER: gacagat instead of cactgtg, noncanonical J-NONAMER: aaatgaggt instead of ggtttttgt
  6. frameshift in J-REGION : deletion of 1 nt
  7. noncanonical J-MOTIF: FDXG instead of FGXG
  8. STOP-CODON in J-REGION, no DONOR-SPLICE
  9. STOP-CODON in J-REGION
  10. the first codon of the germline J-REGION is a STOP-CODON which may disappear during rearrangements
  11. noncanonical DONOR-SPLICE: nct instead of ngt
  12. noncanonical DONOR-SPLICE: ngc instead of ngt, noncanonical J-MOTIF: FGXN instead of FGXG
IMGT references: ↑
  1. Manso,T. et al., IMGT(R) databases, related tools and web resources through three main axes of research and development, Nucleic Acids Res, vol. 50, no. D1, 2022, pp. D1262-D1272. PUBMED: 34875068