Rabbit (Oryctolagus cuniculus) TRAV genes
The rabbit (
Oryctolagus cuniculus) TRA locus on chromosome 17 comprises 62 TRAV genes belonging to 32 TRAV subgroups:
IMGT group |
IMGT subgroup |
Functional |
ORF |
Pseudogene |
Total |
TRAV |
TRAV4 |
1 |
0 |
0 |
1 |
TRAV5 |
8 |
0 |
2 (2:0) |
10 |
TRAV8 |
5 |
0 |
0 |
5 |
TRAV9 |
4 |
0 |
0 |
4 |
TRAV10 |
1 |
0 |
0 |
1 |
TRAV12 |
1 |
0 |
0 |
1 |
TRAV13 |
3 |
0 |
1 (1:0) |
4 |
TRAV14 |
2 |
0 |
0 |
2 |
TRAV16 |
1 |
0 |
0 |
1 |
TRAV17 |
1 |
0 |
0 |
1 |
TRAV18 |
1 |
0 |
0 |
1 |
TRAV19 |
1 |
0 |
0 |
1 |
TRAV20 |
0 |
0 |
1 (0:1) |
1 |
TRAV21 |
0 |
0 |
1 (0:1) |
1 |
TRAV23 |
1 |
0 |
0 |
1 |
TRAV24 |
1 |
0 |
0 |
1 |
TRAV26 |
1 |
0 |
0 |
1 |
TRAV27 |
0 |
0 |
1 (0:1) |
1 |
TRAV28 |
0 |
0 |
1 (1:0) |
1 |
TRAV29 |
0 |
0 |
1 (0:1) |
1 |
TRAV32 |
1 |
0 |
0 |
1 |
TRAV35 |
0 |
0 |
1 (0:1) |
1 |
TRAV36 |
0 |
0 |
1 (0:1) |
1 |
TRAV37 |
1 |
0 |
0 |
1 |
TRAV38 |
2 |
0 |
0 |
2 |
TRAV39 |
1 |
0 |
0 |
1 |
TRAV41 |
1 |
0 |
0 |
1 |
TRAV42 |
1 |
0 |
0 |
1 |
TRAV43 |
3 |
2 |
0 |
5 |
TRAV45 |
6 |
0 |
1 (1:0) |
7 |
TRAV46 |
0 |
0 |
1 (1:0) |
1 |
Total |
48 |
2 |
12 |
62 |
In the column 'Pseudogene', the number of pseudogenes with V-REGION in-frame and the number of pseudogenes with frameshift(s) are shown separated by two dots, between parentheses.
Rabbit (Oryctolagus cuniculus) TRAJ genes
The rabbit (
Oryctolagus cuniculus) TRA locus on chromosome 17 comprises 58 TRAJ genes belonging to 58 TRAJ subgroups:
IMGT group |
IMGT set or subgroup (if any) |
Functional |
ORF |
Pseudogene |
Total |
TRAJ |
TRAJ1 |
0 |
1 |
0 |
1 |
TRAJ2 |
1 |
0 |
0 |
1 |
TRAJ3 |
1 |
0 |
0 |
1 |
TRAJ4 |
1 |
0 |
0 |
1 |
TRAJ5 |
0 |
1 |
0 |
1 |
TRAJ6 |
1 |
0 |
0 |
1 |
TRAJ7 |
1 |
0 |
0 |
1 |
TRAJ8 |
1 |
0 |
0 |
1 |
TRAJ9 |
1 |
0 |
0 |
1 |
TRAJ10 |
0 |
1 |
0 |
1 |
TRAJ11 |
1 |
0 |
0 |
1 |
TRAJ12 |
1 |
0 |
0 |
1 |
TRAJ13 |
1 |
0 |
0 |
1 |
TRAJ14 |
0 |
1 |
0 |
1 |
TRAJ15 |
1 |
0 |
0 |
1 |
TRAJ16 |
1 |
0 |
0 |
1 |
TRAJ17 |
1 |
0 |
0 |
1 |
TRAJ18 |
1 |
0 |
0 |
1 |
TRAJ19 |
0 |
1 |
0 |
1 |
TRAJ20 |
1 |
0 |
0 |
1 |
TRAJ21 |
1 |
0 |
0 |
1 |
TRAJ22 |
1 |
0 |
0 |
1 |
TRAJ23 |
1 |
0 |
0 |
1 |
TRAJ24 |
1 |
0 |
0 |
1 |
TRAJ25 |
1 |
0 |
0 |
1 |
TRAJ26 |
1 |
0 |
0 |
1 |
TRAJ27 |
1 |
0 |
0 |
1 |
TRAJ28 |
1 |
0 |
0 |
1 |
TRAJ29 |
1 |
0 |
0 |
1 |
TRAJ30 |
0 |
1 |
0 |
1 |
TRAJ31 |
1 |
0 |
0 |
1 |
TRAJ32 |
1 |
0 |
0 |
1 |
TRAJ33 |
1 |
0 |
0 |
1 |
TRAJ34 |
1 |
0 |
0 |
1 |
TRAJ35 |
1 |
0 |
0 |
1 |
TRAJ36 |
1 |
0 |
0 |
1 |
TRAJ37 |
1 |
0 |
0 |
1 |
TRAJ38 |
1 |
0 |
0 |
1 |
TRAJ39 |
1 |
0 |
0 |
1 |
TRAJ40 |
1 |
0 |
0 |
1 |
TRAJ41 |
1 |
0 |
0 |
1 |
TRAJ42 |
1 |
0 |
0 |
1 |
TRAJ43 |
1 |
0 |
0 |
1 |
TRAJ44 |
1 |
0 |
0 |
1 |
TRAJ45 |
1 |
0 |
0 |
1 |
TRAJ46 |
0 |
0 |
1 |
1 |
TRAJ47 |
1 |
0 |
0 |
1 |
TRAJ48 |
1 |
0 |
0 |
1 |
TRAJ49 |
1 |
0 |
0 |
1 |
TRAJ50 |
1 |
0 |
0 |
1 |
TRAJ51 |
0 |
1 |
0 |
1 |
TRAJ52 |
1 |
0 |
0 |
1 |
TRAJ53 |
1 |
0 |
0 |
1 |
TRAJ54 |
1 |
0 |
0 |
1 |
TRAJ56 |
1 |
0 |
0 |
1 |
TRAJ57 |
1 |
0 |
0 |
1 |
TRAJ58 |
1 |
0 |
0 |
1 |
TRAJ61 |
0 |
1 |
0 |
1 |
Total |
49 |
8 |
1 |
58 |
More information:
Gene table: rabbit (Oryctolagus cuniculus) TRAV
Gene table: rabbit (Oryctolagus cuniculus) TRAJ
Locus description: rabbit (Oryctolagus cuniculus) TRA
Potential germline repertoire: rabbit (Oryctolagus cuniculus) TRDV, TRDD and TRDJ genes on chromosome 17