Sumatran orangutan (Pongo abelii) TRBV genes
The Sumatran orangutan (
Pongo abelii) TRB locus on chromosome 6 comprises 78 TRBV genes belonging to 33 TRBV subgroups :
The TRBV genes are localized in 2 V-CLUSTER:
- the 5' V-CLUSTER, classically in 5' of the TRBD, TRBJ and TRBC, includes 77 TRBV genes belonging to 32 subgroups.
- the 3' V-CLUSTER, downstream of the TRBC in inverted orientation, includes 1 TRBV gene.
IMGT group |
IMGT set or subgroup (if any) |
Functional |
ORF |
Pseudogene |
Total |
TRBV |
TRBV1 |
0 |
0 |
4(3:1) |
4 |
TRBV2 |
4 |
0 |
0 |
4 |
TRBV3 |
3 |
0 |
1(0:1) |
4 |
TRBV4 |
4 |
0 |
1(1:0) |
5 |
TRBV5 |
4 |
1 |
2(1:1) |
7 |
TRBV6 |
6 |
2 |
1(1:0) |
9 |
TRBV7 |
4 |
2 |
2(1:1) |
8 |
TRBV8 |
0 |
0 |
2(0:2) |
2 |
TRBV9 |
1 |
0 |
0 |
1 |
TRBV10 |
1 |
2 |
0 |
3 |
TRBV11 |
1 |
1 |
1(0:1) |
3 |
TRBV12 |
4 |
2 |
1(1:0) |
7 |
TRBV13 |
1 |
0 |
0 |
1 |
TRBV14 |
1 |
0 |
0 |
1 |
TRBV15 |
1 |
0 |
0 |
1 |
TRBV16 |
1 |
0 |
0 |
1 |
TRBV17 |
0 |
0 |
1(1:0) |
1 |
TRBV18 |
1 |
0 |
0 |
1 |
TRBV19 |
1 |
0 |
0 |
1 |
TRBV20 |
1 |
0 |
0 |
1 |
TRBV21 |
0 |
0 |
1(1:0) |
1 |
TRBV22 |
0 |
0 |
1(0:1) |
1 |
TRBV23 |
0 |
0 |
1(1:0) |
1 |
TRBV24 |
1 |
0 |
0 |
1 |
TRBV25 |
1 |
0 |
0 |
1 |
TRBV26 |
0 |
0 |
1(1:0) |
1 |
TRBV27 |
1 |
0 |
0 |
1 |
TRBV28 |
1 |
0 |
0 |
1 |
TRBV29 |
1 |
0 |
0 |
1 |
TRBV30 |
0 |
0 |
1(1:0) |
1 |
TRBVA |
0 |
0 |
1(0:1) |
1 |
TRBVB |
0 |
0 |
1(0:1) |
1 |
TRBVC |
0 |
0 |
1(0:1) |
1 |
Total |
44 |
10 |
24 |
78 |
In the column 'Pseudogene', the number of pseudogenes with V-REGION in-frame and the number of pseudogenes with frameshift(s) are shown
separated by two dots, between parentheses.
Sumatran orangutan (Pongo abelii) TRBD genes
The Sumatran orangutan (
Pongo abelii) TRB locus on chromosome 6 comprises 2 TRBD genes belonging to 2 TRBD sets:
IMGT group |
IMGT set or subgroup (if any) |
Functional |
ORF |
Pseudogene |
Total |
TRBD |
TRBD1 |
1 |
0 |
0 |
1 |
TRBD2 |
1 |
0 |
0 |
1 |
Total |
2 |
0 |
0 |
2 |
Sumatran orangutan (Pongo abelii) TRBJ genes
The Sumatran orangutan (
Pongo abelii) TRB locus on chromosome 6 comprises 14 TRBJ genes belonging to 2 sets:
IMGT group |
IMGT set or subgroup (if any) |
Functional |
ORF |
Pseudogene |
Total |
TRBJ |
TRBJ1 |
3 |
2 |
1(1:0) |
6 |
TRBJ2 |
7 |
1 |
0 |
8 |
Total |
10 |
3 |
1(1:0) |
14 |
More information:
Gene table: Sumatran orangutan (Pongo abelii) TRBV
Gene table: Sumatran orangutan (Pongo abelii) TRBD
Gene table: Sumatran orangutan (Pongo abelii) TRBJ
Gene table: Sumatran orangutan (Pongo abelii) TRBC
Locus description: Sumatran orangutan (Pongo abelii) TRB