IMGT Repertoire (IG and TR)


Locus gene order: rainbow trout (Oncorhynchus mykiss) IGH locus on chromosome 13 (locus A)

Relative position (order) of a gene, in a locus from the 5' end of a locus to its 3' end. The number '0' indicates that the relative position is unknown.

Rainbow trout (Oncorhynchus mykiss) IGH locus on chromosome 13 (locus A)

IMGT gene name IMGT locus gene order IMGT gene orientation in locus Copy Number Variation (CNV)
IGHV16-48-1 1 direct
IGHV15-48 2 direct
IGHV1-47-1 3 direct
IGHV10-47 4 direct
IGHV1-46-2 5 direct
IGHV10-46-1 6 direct
IGHV8-46 7 direct
IGHV3-45-1 8 direct
IGHV9-45 9 direct
IGHV4-44 10 direct
IGHV1-43 11 direct
IGHV1-42 12 direct
IGHV1-41 13 direct
IGHV10-40-1 14 direct
IGHV8-40 15 direct
IGHV6-39-1 16 direct
IGHV13-39 17 direct
IGHV1-39 18 direct
IGHV6-38-1 19 direct
IGHV16-38 20 direct
IGHV16-37 21 direct
IGHV4-36-2 22 direct
IGHV8-36-1 23 direct
IGHV1-36 24 direct
IGHV6-35 25 direct
IGHV9-34 26 direct
IGHV14-33 27 direct
IGHV6-32 28 direct
IGHV6-31-3 29 direct
IGHV6-31-2 30 direct
IGHV6-31-1 31 direct
IGHV6-31 32 direct
IGHD01 33 direct
IGHV8-30 34 direct
IGHV8-29 35 direct
IGHV15-28-1 36 opposite
IGHV2-28 37 direct
IGHV2-27 38 direct
IGHV6-26 39 direct
IGHV11-25 40 direct
IGHV12-24-3 41 direct
IGHV3-24-2 42 direct
IGHV3-24-1 43 direct
IGHV9-24 44 direct
IGHV9-23 45 direct
IGHV1-22-1 46 direct
IGHV4-22 47 direct
IGHV1-21 48 direct
IGHV3-20-2 49 direct
IGHV1-20-1 50 direct
IGHV3-20 51 direct
IGHV9-19-4 52 direct
IGHV1-19-3 53 direct
IGHV4-19-2 54 direct
IGHV1-19-1 55 direct
IGHV8-19 56 direct
IGHV1-18 57 direct
IGHV6-17-1 58 direct
IGHV7-17 59 direct
IGHV1-16-2 60 direct
IGHV4-16-1 61 opposite
IGHV9-16 62 opposite
IGHV9-15 63 opposite
IGHV3-14-2 64 opposite
IGHV4-14-1 65 opposite
IGHD1T1 67 direct
IGHD2T1 68 direct
IGHJ1T1 69 direct
IGHJ2T1 70 direct
IGHT1 71 direct
IGHD3T1 72 direct
IGHV16-14 73 direct
IGHV11-13-1 74 opposite
IGHV1-13 75 direct
IGHV10-12 76 direct
IGHV8-11 77 direct
IGHV11-10-1 78 direct
IGHV1-10 79 direct
IGHV16-9 80 opposite
IGHV2-8 81 direct
IGHV9-7-2 82 direct
IGHV7-7-1 83 direct
IGHV1-7 84 direct
IGHV4-6 85 direct
IGHD1T2 86 direct
IGHD2T2 87 direct
IGHJ1T2 88 direct
IGHJ2T2 89 direct
IGHT2 90 direct
IGHV8-5 91 opposite
IGHV6-4 92 opposite
IGHV6-3 93 opposite
IGHV1-2 94 direct
IGHV4-1 95 direct
IGHD1 96 direct
IGHD2 97 direct
IGHD3 98 direct
IGHD4 99 direct
IGHD5 100 direct
IGHD6 101 direct
IGHJ1 102 direct
IGHJ2 103 direct
IGHJ3 104 direct
IGHJ4 105 direct
IGHJ5 106 direct
IGHM 107 direct
IGHJ6 108 direct

Rainbow trout (Oncorhynchus mykiss) IGH locus on chromosome 12 (locus B)

IMGT gene name IMGT locus gene order IMGT gene orientation in locus Copy Number Variation (CNV)
IGHV16D-79 1 direct
IGHV2D-78-1 2 direct
IGHV15D-78 3 direct
IGHV1D-77 4 direct
IGHV6D-76 5 direct
IGHV4D-75-1 6 direct
IGHV3D-75 7 direct
IGHV1D-74 8 direct
IGHV1D-73 9 direct
IGHV4D-72 10 direct
IGHV1D-71-1 11 direct
IGHV12D-71 12 opposite
IGHV1D-70-1 13 direct
IGHV1D-70 14 direct
IGHV2D-69-1 15 direct
IGHV15D-69 16 direct
IGHV2D-68 17 direct
IGHV1D-67 18 direct
IGHV15D-66 19 direct
IGHD01D 20 direct
IGHV1D-65-3 21 direct
IGHV6D-65-2 22 direct
IGHV11D-65-1 23 direct
IGHV1D-65 24 direct
IGHV6D-64 25 direct
IGHV11D-63-1 26 direct
IGHV1D-63 27 direct
IGHD02D 28 direct
IGHV7D-62 29 direct
IGHV7D-61 30 direct
IGHV4D-60 31 direct
IGHV1D-59 32 direct
IGHD03D 33 direct
IGHV4D-58 34 direct
IGHV12D-56 35 opposite
IGHV1D-55-1 36 direct
IGHV16D-55 37 direct
IGHV15D-54 38 direct
IGHV15D-53 39 direct
IGHV2D-52-1 40 direct
IGHV2D-52 41 direct
IGHV2D-51 42 direct
IGHV2D-50 43 direct
IGHV15D-49 44 direct
IGHD04D 45 direct
IGHV1D-48 46 direct
IGHV6D-47 47 direct
IGHV1D-46-3 48 direct
IGHV6D-46-2 49 direct
IGHV11D-46-1 50 direct
IGHV1D-46 51 direct
IGHV11D-45-1 52 direct
IGHD05D 53 direct
IGHV7D-45 54 direct
IGHV7D-44 55 direct
IGHV4D-43 56 direct
IGHV1D-42 57 direct
IGHD06D 58 direct
IGHV16D-41 59 direct
IGHV15D-40-2 60 direct
IGHV16D-40-1 61 direct
IGHV6D-40 62 direct
IGHV3D-39-1 63 direct
IGHV1D-39 64 direct
IGHV1D-38 65 direct
IGHV4D-37 66 direct
IGHV12D-36 67 opposite
IGHV1D-35 68 direct
IGHV1D-34-1 69 direct
IGHV16D-34 70 direct
IGHV2D-33 71 direct
IGHV15D-32 72 direct
IGHV6D-31 73 direct
IGHV3D-30 74 direct
IGHV2D-29-1 75 direct
IGHV2D-29 76 direct
IGHV2D-28 77 direct
IGHV15D-27-3 78 direct
IGHV11D-27-2 79 direct
IGHV9D-27-1 80 direct
IGHV6D-27 81 direct
IGHV10D-26 82 direct
IGHV1D-25 83 direct
IGHV6D-24-1 84 direct
IGHV4D-24 85 direct
IGHD07D 86 direct
IGHV7D-23-1 87 direct
IGHV4D-23 88 direct
IGHV1D-22 89 direct
IGHD08D 90 direct
IGHV1D-21-1 91 direct
IGHV1D-21 92 direct
IGHV8D-20 93 direct
IGHV6D-19 94 direct
IGHV6D-18-1 95 direct
IGHV6D-18 96 direct
IGHV7D-17-1 97 direct
IGHV1D-17 98 direct
IGHV4D-16-1 99 direct
IGHV1D-16 100 direct
IGHV6D-15-3 101 direct
IGHV1D-15-2 102 direct
IGHV3D-15-1 103 direct
IGHV1D-15 104 direct
IGHV1D-14 105 direct
IGHV4D-13 106 direct
IGHV1D-12 107 direct
IGHV5D-11-1 108 direct
IGHD1T1D 109 direct
IGHD2T1D 110 direct
IGHJ1T1D 111 direct
IGHJ2T1D 112 direct
IGHT1D 113 direct
IGHD3T1D 114 direct
IGHD4T1D 115 direct
IGHD5T1D 116 direct
IGHV2D-11 117 direct
IGHV6D-10 118 direct
IGHV10D-9 119 direct
IGHV6D-8 120 direct
IGHV10D-7 121 direct
IGHV8D-6-1 122 direct
IGHV6D-6 123 direct
IGHV1D-5-1 124 direct
IGHV6D-5 125 direct
IGHV6D-4-5 126 direct
IGHV9D-4-4 127 opposite
IGHV3D-4-3 128 opposite
IGHV1D-4-2 129 direct
IGHV3D-4-1 130 direct
IGHV1D-4 131 direct
IGHV1D-3 132 opposite
IGHV9D-2 133 opposite
IGHV6D-1-1 134 opposite
IGHV16D-1 135 opposite
IGHD1D 136 direct
IGHD2D 137 direct
IGHD3D 138 direct
IGHD4D 139 direct
IGHD5D 140 direct
IGHD6D 141 direct
IGHJ1D 142 direct
IGHJ2D 143 direct
IGHJ3D 144 direct
IGHJ4D 145 direct
IGHJ5D 146 direct
IGHJ6D 147 direct
IGHJ7D 148 direct
IGHMD 149 direct
IGHDD 150 direct
Created:
17/09/2019
Last updated:
22/09/2023
Authors:
LocusGenes/locusdesc/rainbow_trout/IGH/Oncmyc_IGHdesc.html