Here you are: IMGT Web resources > IMGT Repertoire (IG and TR) > 1. Locus and genes

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

Click on:

IMGT gene name IMGT allele name Fct Chromosomal localization T Pr Positions in the locus IMGT/LIGM-DB reference sequences IMGT/LIGM-DB sequences from the literature
Strain Clone names Exons Accession numbers Positions in the sequence Secondary accession numbers Strain Clone names Accession numbers Positions in the sequence
TRAC TRAC*01 F 14 (19.7 cM) B10.D2-H2dm1 (2) Calpha EX1 M64239 [2] Calpha M14506 [1] c
C57BL/6J IMGT000082 [6] 1802554..1802814
129/SvJ AE007512 [7] 1657818-1658078
EX2 M64239 [2] Calpha M14506 [1] c
C57BL/6J IMGT000082 [6] 1804139..1804183
129/SvJ AE007512 [7] 1659401-1659445
EX3 M64239 [2] Calpha M14506 [1] c
C57BL/6J IMGT000082 [6] 1805024..1805131
129/SvJ AE007512 [7] 1659401-1659445
EX4UTR (1) M64239 [2] Calpha M14506 [1] (3) c
C57BL/6J IMGT000082 [6] 1660285-1660392
129/SvJ AE007512 [7] 1660980-1661492
TRAC*02 (F) 14 (19.7 cM) BALB/c Calpha EX1 X67127 [3] c X01134 [4] c
M16118 [5] c
M16119 [5] c
EX2 X67127 [3] c X01134 [4] c
M16118 [5] c
M16119 [5] c
EX3 X67127 [3] c X01134 [4] c
M16118 [5] c
M16119 [5] c
EX4UTR (1) X67127 [3] c X01134 [4] c
M16118 [5] c
M16119 [5] c

c: cDNA sequence.

IMGT notes:
  1. (1) Since EX4 is untranslated, nucleotide differences observed in EX4 are not taken into account for the description of alleles.
  2. (2) B10.D2-H2dm1 is a congenic strain, B10 is the abbreviated symbol of C57BL/10 and D2 the abbreviated symbol of DBA/2J.
  3. (3) EX4 partial in 3'.
IMGT references:
  1. [1] Imai K. et al., Proc. Natl. Acad. Sci. U.S.A., 83, 8708-8712 (1986). PMID:2946043
  2. [2] Wilson R.K. et al., Genomics, 13, 1198-1208 (1992). PMID:1505953
  3. [3] Austrup F. et al., Immunobiology, 187, 36-50 (1993). PMID:7685001
  4. [4] Saito H. et al., Nature, 312, 36-40 (1984). PMID:6208487
  5. [5] Sherman D.H. et al., Mol. Cell. Biol., 7, 1865-1872 (1987). PMID:2439899
  6. [6] Deanna C. et al, PLoS Biol., (9)7 (2011). PMID:21750661
  7. [7] Lee I.Y. et al., Unpublished (1998).
Created:
09/05/2001
Last updated:
22/09/2023
Authors:
Nathalie Bosc and Guilhem Zeitoun