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"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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Click on the strain name to get information on the strain (link to MGD).

The accession number AF037352 encompasses 105726 bp and includes the 5' part of the locus from TRGV7 to dowstream from TRGC3. AF021335 encompasses 62031 bp and includes the 3' part of the locus from TRGC2 to TRGC4. The mouse strain is not specified in these two accession numbers.

IMGT gene name IMGT allele name Fct Chromosomal localization T Pr Positions in the locus IMGT/LIGM-DB reference sequences IMGT/LIGM-DB sequences from the literature
Strain Clone names Exons Accession numbers Positions in the sequence Secondary accession numbers Strain Clone names Accession numbers Positions in the sequence
TRGC1 TRGC1*01 F 13 (10.0 cM) BALB/c Cgamma1 EX1 M13340 [2] Cgamma1 AF037352 [4]
EX2 M13341 [2] Cgamma1 AF037352 [4]
EX3 M13342 [2] Cgamma1 AF037352 [4]
TRGC2 TRGC2*01 F 13 (10.0 cM) BALB/c C10.5 EX1 M12834 [1] Cgamma2 AF021335 [5]
EX2 M12835 [1] Cgamma2 AF021335 [5]
EX3 M12836 [1] Cgamma2 AF021335 [5]
TRGC3 TRGC3*01 ORF (1) 13 (10.0 cM) BALB/c C7.5 EX1 M12837 [1]
EX2 M12838 [1]
EX3 M12839 [1]
TRGC3*02 P (2) 13 (10.0 cM) BALB/c Cgamma3 EX1 AF037352 [4]
EX2 AF037352 [4]
EX3 AF037352 [4]
TRGC4 TRGC4*01 F (2) 13 (10.0 cM) BALB/c Cgamma4 EX1 AF021335 [5] Cgamma4 L02339 [3]
EX2a L02340 [3] Cgamma4 AF021335 [5]
EX2b L02341 [3] Cgamma4 AF021335 [5]
EX3 AF021335 [5]
IMGT notes:
  1. (1) Defective DONOR-SPLICE in EX2.
  2. (2) The INSERTION of 1 nucleotide (c) between codons 83/84 and the INSERTION of 1 nucleotide (c) between codons 91/92 lead to frameshifts in EX1.
IMGT references:
  1. [1] Hayday A.C. et al., Cell, 40, 259-269 (1985). PMID:3917858
  2. [2] Garman R.D. et al., Cell, 45, 733-742 (1986). PMID:3486721
  3. [3] Vernooij B.T. et al., Genomics, 17, 566-574 (1993). PMID:8244371
  4. [4] Zhou Q. et al., Unpublished.
  5. [5] Parlee M.J. et al., Unpublished.
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Géraldine Folch