Citing IMGT databases: Manso T. et al. IMGT® databases, related tools and web resources through three main axes of research and development. Nucleic Acids Res. 2022 Jan 7;50(D1):D1262-D1272. doi: 10.1093/nar/gkab1136 PMID: 34875068 Free PMC article.
Program version: v. 

Addition of 'Score for IMGT allele confirmation' as well as NCBI TPA accession numbers.
September 20th, 2023.

Implementation of the dynamic gene table.

Gene table legend:

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene, when the data have been confirmed by several studies.

Functionality is shown in parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.

IMGT allele confirmation: a scoring system is employed to signify the frequency of occurrences of a specific allele within sequence data. A single star (*) indicates that no instances of the allele have been identified in the literature. Two stars (**) indicate the discovery of one literature sequence containing the allele. If more than one literature sequence is found to contain the allele, it is designated with three stars (***). In the Excel file, the stars are represented by the plus symbol (+).

Click on:
  • IMGT gene name to get the corresponding IMGT/GENE-DB entry (link).
  • IMGT allele name to see the corresponding Alignments of alleles (link).
  • Accession number to get the corresponding IMGT/LIGM-DB entry (link).
  • MAP: mapped sequences. Click to access GENE-DB «LOCALIZATION IN GENOME ASSEMBLIES» (link).
  • [number] to access the corresponding IMGT reference (popover).
  • (number) to see the corresponding IMGT note (popover).
Options:
  • You can show/hide columns (), download data () or put the table in fullscreen () using buttons.
See also (IMGT Scientific chart):
Select a species and a IMGT group to get the gene table:
Only IMGT available species/group are shown in the drop-down list.
The gene table can take several seconds to appear, please be patient.
Gene table of western lowland gorilla (Gorilla gorilla gorilla) TRBV IMGT group:
IMGT sub­groupIMGT gene nameIMGT allele nameFctScore for
IMGT allele
confirmation
Chromosomosal
localization
R T PrIMGT/LIGM-DB reference sequencesIMGT/LIGM-DB sequences from the literature
IsolateClone namesAccession
numbers
Positions
in the sequence
(L-V-GENE-UNIT)
or V-REGION (*)
Secondary
accession
numbers
IsolateClone namesAccession
numbers
Positions
in the sequence
(L-V-GENE-UNIT)
or V-REGION (*)
TRBV1TRBV1 TRBV1*01 (1) Kamilah BK064850 [1] MAP 9835-10323 KB3781 BK064852 [1] 9835-10323
KB3781 BK064853 [1] 9835-10323
Susie3 BK064851 9835-10323
TRBV2TRBV2 TRBV2*01 F Kamilah BK064850 [1] MAP 11818-12291 KB3781 BK064852 [1] 11829-12302
KB3781 BK064853 [1] 11829-12302
Susie3 BK064851 11829-12302
TRBV3TRBV3-1 TRBV3-1*01 (2) Kamilah BK064850 [1] MAP 19401-19899 KB3781 BK064852 [1] 19414-19912
KB3781 BK064853 [1] 19414-19912
Susie3 BK064851 19414-19912
TRBV3TRBV3-1-1 TRBV3-1-1*01 (3) Susie3 BK064851 MAP 71244-71738
TRBV3TRBV3-2 TRBV3-2*01 F Kamilah BK064850 [1] MAP 71265-71763 KB3781 BK064852 [1] 71270-71768
KB3781 BK064853 [1] 71270-71768
Susie3 BK064851 92520-93018
TRBV4TRBV4-1 TRBV4-1*01 (4) Kamilah BK064850 [1] MAP 24030-24522 KB3781 BK064852 [1] 24043-24535
KB3781 BK064853 [1] 24043-24535
Susie3 BK064851 24043-24535
TRBV4TRBV4-2 TRBV4-2*01 F Kamilah BK064850 [1] MAP 56311-56801 KB3781 BK064852 [1] 56321-56811
KB3781 BK064853 [1] 56321-56811
Susie3 BK064851 56316-56806
TRBV4TRBV4-2-1 TRBV4-2-1*01 (5) Susie3 BK064851 MAP 74690-75179
TRBV4TRBV4-3 TRBV4-3*01 F Kamilah BK064850 [1] MAP 74719-75210 KB3781 BK064852 [1] 74724-75215
KB3781 BK064853 [1] 74724-75215
Susie3 BK064851 95974-96465
TRBV5TRBV5-1 TRBV5-1*01 F Kamilah BK064850 [1] MAP 31865-32373 KB3781 BK064852 [1] 31877-32385
KB3781 BK064853 [1] 31877-32385
Susie3 BK064851 31873-32381
TRBV5TRBV5-2 TRBV5-2*01 (6) Kamilah BK064850 [1] MAP 106286-106765
TRBV5TRBV5-2 TRBV5-2*02 (7) Susie3 BK064851 MAP 127516-127993 KB3781 BK064852 [1] 106293-106770
KB3781 BK064853 [1] 106297-106774
TRBV5TRBV5-3 TRBV5-3*01 ORF (8) Kamilah BK064850 [1] MAP 123313-123818 KB3781 BK064852 [1] 123536-124041
KB3781 BK064853 [1] 123540-124045
Susie3 BK064851 144759-145264
TRBV5TRBV5-4 TRBV5-4*01 F Kamilah BK064850 [1] MAP 170938-171441
TRBV5TRBV5-4 TRBV5-4*02 F Susie3 BK064851 MAP 192404-192909 KB3781 BK064852 [1] 171183-171688
KB3781 BK064853 [1] 171187-171692
TRBV5TRBV5-5 TRBV5-5*01 F Kamilah BK064850 [1] MAP 190374-190879 KB3781 BK064852 [1] 190604-191109
KB3781 BK064853 [1] 190608-191113
TRBV5TRBV5-5 TRBV5-5*02 F Susie3 BK064851 MAP 211808-212313
TRBV5TRBV5-6 TRBV5-6*01 F Kamilah BK064850 [1] MAP 207883-208387 KB3781 BK064852 [1] 208083-208587
KB3781 BK064853 [1] 208087-208591
Susie3 BK064851 229281-229785
TRBV5TRBV5-7 TRBV5-7*01 F Kamilah BK064850 [1] MAP 228235-228740
TRBV5TRBV5-7 TRBV5-7*02 F Susie3 BK064851 MAP 249639-250144
TRBV5TRBV5-7 TRBV5-7*03 F KB3781 BK064852 [1] MAP 228100-228605 KB3781 BK064853 [1] 228104-228609
TRBV6TRBV6-1 TRBV6-1*01 F Kamilah BK064850 [1] MAP 39148-39619 KB3781 BK064852 [1] 39155-39626
KB3781 BK064853 [1] 39155-39626
Susie3 BK064851 39157-39628
TRBV6TRBV6-1-1 TRBV6-1-1*01 F Susie3 BK064851 MAP 61524-61992
TRBV6TRBV6-2 TRBV6-2*01 F Kamilah BK064850 [1] MAP 61524-61992
TRBV6TRBV6-2 TRBV6-2*02 (9) Susie3 BK064851 MAP 82787-83257
TRBV6TRBV6-2 TRBV6-2*03 F KB3781 BK064852 [1] MAP 61530-61998 KB3781 BK064853 [1] 61530-62008
TRBV6TRBV6-3 TRBV6-3*01 F Kamilah BK064850 [1] MAP 83042-83513 KB3781 BK064852 [1] 83047-83518
KB3781 BK064853 [1] 83047-83518
Susie3 BK064851 104297-104768
TRBV6TRBV6-4 TRBV6-4*01 F Kamilah BK064850 [1] MAP 114631-115104
TRBV6TRBV6-4 TRBV6-4*02 F Susie3 BK064851 MAP 135844-136317 KB3781 BK064852 [1] 114619-115092
KB3781 BK064853 [1] 114623-115096
TRBV6TRBV6-5 TRBV6-5*01 F Kamilah BK064850 [1] MAP 158842-159316 KB3781 BK064852 [1] 159087-159561
KB3781 BK064853 [1] 159091-159565
TRBV6TRBV6-5 TRBV6-5*02 F Susie3 BK064851 MAP 180309-180783
TRBV6TRBV6-6 TRBV6-6*01 F Kamilah BK064850 [1] MAP 177429-177900
TRBV6TRBV6-6 TRBV6-6*02 F Susie3 BK064851 MAP 198874-199345 KB3781 BK064852 [1] 177654-178125
KB3781 BK064853 [1] 177658-178129
TRBV6TRBV6-7 TRBV6-7*01 ORF (10) Kamilah BK064850 [1] MAP 195677-196148 KB3781 BK064852 [1] 195910-196381
KB3781 BK064853 [1] 195914-196385
Susie3 BK064851 217110-217581
TRBV6TRBV6-8 TRBV6-8*01 ORF (11) Kamilah BK064850 [1] MAP 215208-215679 Susie3 BK064851 236603-237074
TRBV6TRBV6-8 TRBV6-8*02 F KB3781 BK064852 [1] MAP 215408-215879 KB3781 BK064853 [1] 215412-215883
TRBV7TRBV7-1 TRBV7-1*01 ORF (12) Kamilah BK064850 [1] MAP 43003-43547 KB3781 BK064852 [1] 43010-43554
KB3781 BK064853 [1] 43010-43554
Susie3 BK064851 43012-43556
TRBV7TRBV7-2 TRBV7-2*01 F Kamilah BK064850 [1] MAP 86698-87203 KB3781 BK064852 [1] 86703-87208
KB3781 BK064853 [1] 86703-87208
Susie3 BK064851 107953-108458
TRBV7TRBV7-3 TRBV7-3*01 F Kamilah BK064850 [1] MAP 118407-118918 KB3781 BK064852 [1] 118628-119147
KB3781 BK064853 [1] 118632-119151
Susie3 BK064851 139851-140370
TRBV7TRBV7-4 TRBV7-4*01 F Kamilah BK064850 [1] MAP 163003-163511 KB3781 BK064852 [1] 163248-163756
KB3781 BK064853 [1] 163252-163760
Susie3 BK064851 184469-184977
TRBV7TRBV7-5 TRBV7-5*01 (13) Kamilah BK064850 [1] MAP 181943-182453 Susie3 BK064851 203386-203896
TRBV7TRBV7-5 TRBV7-5*02 (13) KB3781 BK064852 [1] MAP 182169-182679 KB3781 BK064853 [1] 182173-182683
TRBV7TRBV7-6 TRBV7-6*01 ORF (14) Kamilah BK064850 [1] MAP 199992-200522
TRBV7TRBV7-6 TRBV7-6*02 (15) Susie3 BK064851 MAP 221417-221919
TRBV7TRBV7-6 TRBV7-6*03 F KB3781 BK064852 [1] MAP 200220-200723 KB3781 BK064853 [1] 200224-200727
TRBV7TRBV7-7 TRBV7-7*01 F Kamilah BK064850 [1] MAP 219459-219997
TRBV7TRBV7-7 TRBV7-7*02 (16) Susie3 BK064851 MAP 240850-241401
TRBV7TRBV7-7 TRBV7-7*03 F KB3781 BK064852 [1] MAP 219660-220188 KB3781 BK064853 [1] 219664-220192
TRBV7TRBV7-9 TRBV7-9*01 F Kamilah BK064850 [1] MAP 237494-238011 KB3781 BK064852 [1] 237360-237877
KB3781 BK064853 [1] 237364-237881
TRBV7TRBV7-9 TRBV7-9*02 F Susie3 BK064851 MAP 258898-259411
TRBV8TRBV8-1 TRBV8-1*01 (17) Kamilah BK064850 [1] MAP 92450-92728 * KB3781 BK064852 [1] 92443-92721 *
KB3781 BK064853 [1] 92443-92721 *
Susie3 BK064851 113688-113966 *
TRBV8TRBV8-2 TRBV8-2*01 (18) Kamilah BK064850 [1] MAP 120297-120796
TRBV8TRBV8-2 TRBV8-2*02 (18) Susie3 BK064851 MAP 141743-142242 KB3781 BK064852 [1] 120520-121019
KB3781 BK064853 [1] 120524-121023
TRBV9TRBV9 TRBV9*01 F Kamilah BK064850 [1] MAP 126037-126550 KB3781 BK064852 [1] 126260-126773
KB3781 BK064853 [1] 126264-126777
Susie3 BK064851 147483-147996
TRBV10TRBV10-1 TRBV10-1*01 F Kamilah BK064850 [1] MAP 134072-134560
TRBV10TRBV10-1 TRBV10-1*02 (19) Susie3 BK064851 MAP 155543-156035 KB3781 BK064852 [1] 134320-134812
KB3781 BK064853 [1] 134324-134816
TRBV10TRBV10-3 TRBV10-3*01 ORF (20) Kamilah BK064850 [1] MAP 253254-253744 KB3781 BK064852 [1] 253138-253628
KB3781 BK064853 [1] 253142-253632
Susie3 BK064851 274590-275080
TRBV11TRBV11-2 TRBV11-2*01 F Kamilah BK064850 [1] MAP 141824-142310
TRBV11TRBV11-2 TRBV11-2*02 F Susie3 BK064851 MAP 163289-163775 KB3781 BK064852 [1] 142073-142559
KB3781 BK064853 [1] 142077-142563
TRBV11TRBV11-3 TRBV11-3*01 F Kamilah BK064850 [1] MAP 263952-264428
TRBV11TRBV11-3 TRBV11-3*02 F Susie3 BK064851 MAP 285284-285760
TRBV11TRBV11-3 TRBV11-3*03 F KB3781 BK064852 [1] MAP 263837-264313 KB3781 BK064853 [1] 263841-264317
TRBV12TRBV12-2 TRBV12-2*01 F Kamilah BK064850 [1] MAP 148717-149198 KB3781 BK064852 [1] 148966-149447
KB3781 BK064853 [1] 148970-149451
TRBV12TRBV12-2 TRBV12-2*02 F Susie3 BK064851 MAP 170178-170659
TRBV12TRBV12-3 TRBV12-3*01 F Kamilah BK064850 [1] MAP 269545-270030
TRBV12TRBV12-3 TRBV12-3*02 F Susie3 BK064851 MAP 290892-291377 KB3781 BK064852 [1] 269440-269925
KB3781 BK064853 [1] 269444-269929
TRBV12TRBV12-4 TRBV12-4*01 F Kamilah BK064850 [1] MAP 272857-273342
TRBV12TRBV12-4 TRBV12-4*02 F Susie3 BK064851 MAP 294204-294689 KB3781 BK064852 [1] 272753-273238
KB3781 BK064853 [1] 272757-273242
TRBV12TRBV12-5 TRBV12-5*01 F Kamilah BK064850 [1] MAP 288895-289380 KB3781 BK064852 [1] 290140-290625
KB3781 BK064853 [1] 290144-290629
TRBV12TRBV12-5 TRBV12-5*02 F Susie3 BK064851 MAP 311585-312070
TRBV13TRBV13 TRBV13*01 F Kamilah BK064850 [1] MAP 244041-244563 KB3781 BK064852 [1] 243905-244427
Susie3 BK064851 265433-265955
TRBV13TRBV13 TRBV13*02 F KB3781 BK064853 [1] MAP 243909-244431
TRBV14TRBV14 TRBV14*01 F Kamilah BK064850 [1] MAP 295824-296295 KB3781 BK064852 [1] 297069-297540
KB3781 BK064853 [1] 297073-297544
Susie3 BK064851 318514-318985
TRBV15TRBV15 TRBV15*01 F Kamilah BK064850 [1] MAP 300911-301418 KB3781 BK064852 [1] 302156-302663
KB3781 BK064853 [1] 302160-302667
Susie3 BK064851 323601-324108
TRBV16TRBV16 TRBV16*01 F Kamilah BK064850 [1] MAP 305924-306415
TRBV16TRBV16 TRBV16*02 F Susie3 BK064851 MAP 328614-329106 KB3781 BK064852 [1] 307169-307661
KB3781 BK064853 [1] 307173-307665
TRBV17TRBV17 TRBV17*01 (21) Kamilah BK064850 [1] MAP 309534-310315
TRBV17TRBV17 TRBV17*02 (21) Susie3 BK064851 MAP 332230-333017 KB3781 BK064852 [1] 310788-311576
KB3781 BK064853 [1] 310793-311581
TRBV18TRBV18 TRBV18*01 F Kamilah BK064850 [1] MAP 323616-324273 KB3781 BK064853 [1] 324884-325541
Susie3 BK064851 346325-346982
TRBV18TRBV18 TRBV18*02 F KB3781 BK064852 [1] MAP 324890-325547
TRBV19TRBV19 TRBV19*01 F Kamilah BK064850 [1] MAP 326886-327400 KB3781 BK064852 [1](28) 328202-328716
KB3781 BK064853 [1] 328154-328668
Susie3 BK064851 349593-350107
TRBV20TRBV20-1 TRBV20-1*02 F Kamilah BK064850 [1] MAP 334560-335271 KB3781 BK064852 [1](29) 335890-336602
KB3781 BK064853 [1] 335828-336539
Susie3 BK064851 357267-357978
TRBV21TRBV21-1 TRBV21-1*01 F Kamilah BK064850 [1] MAP 344752-345249 KB3781 BK064852 [1] 346020-346517
KB3781 BK064853 [1] 346035-346532
Susie3 BK064851 367446-367943
TRBV22TRBV22-1 TRBV22-1*01 ORF (22) Kamilah BK064850 [1] MAP 349571-350061 KB3781 BK064852 [1] 350837-351327
KB3781 BK064853 [1] 350854-351344
Susie3 BK064851 372265-372755
TRBV23TRBV23-1 TRBV23-1*01 F Kamilah BK064850 [1] MAP 353790-354310 KB3781 BK064853 [1] 355075-355595
Susie3 BK064851 376486-377006
TRBV23TRBV23-1 TRBV23-1*02 F KB3781 BK064852 [1] MAP 355057-355577
TRBV24TRBV24-1 TRBV24-1*01 F Kamilah BK064850 [1] MAP 364545-365060 KB3781 BK064852 [1] 365810-366325
KB3781 BK064853 [1] 365830-366345
Susie3 BK064851 387239-387754
TRBV25TRBV25-1 TRBV25-1*01 F Kamilah BK064850 [1] MAP 378591-379097 KB3781 BK064852 [1] 379990-380496
KB3781 BK064853 [1] 379876-380382
Susie3 BK064851 401285-401791
TRBV26TRBV26 TRBV26*01 (15) Kamilah BK064850 [1] MAP 403461-404006 KB3781 BK064853 [1] 404744-405289
Susie3 BK064851 426155-426700
TRBV26TRBV26 TRBV26*02 (15) KB3781 BK064852 [1] MAP 404880-405423
TRBV27TRBV27 TRBV27*01 F Kamilah BK064850 [1] MAP 423150-423661 KB3781 BK064852 [1] 424567-425077
Susie3 BK064851 445844-446355
TRBV27TRBV27 TRBV27*02 F KB3781 BK064853 [1] MAP 424433-424944
TRBV28TRBV28 TRBV28*01 F Kamilah BK064850 [1] MAP 428449-428968 KB3781 BK064853 [1] 429728-430247
Susie3 BK064851 451138-451657
TRBV28TRBV28 TRBV28*02 F KB3781 BK064852 [1] MAP 429854-430373
TRBV28TRBV28-1 TRBV28-1*01 (23) Susie3 BK064851 MAP <498216-498727
TRBV29TRBV29-1 TRBV29-1*01 F Kamilah BK064850 [1] MAP 448055-448715 KB3781 BK064852 [1] 449459-450119
KB3781 BK064853 [1] 449292-449952
TRBV29TRBV29-1 TRBV29-1*02 (24) Susie3 BK064851 MAP 470715-471354
TRBV29TRBV29-1-1 TRBV29-1-1*01 F Susie3 BK064851 MAP 517778-518438
TRBV30TRBV30 TRBV30*01 F Kamilah BK064850 [1] MAP complement(551175-551917) KB3781 BK064852 [1] complement(552578-553320)
KB3781 BK064853 [1] complement(552420-553162)
Susie3 BK064851 complement(620838-621580)
TRBVATRBVA TRBVA*01 (25) Kamilah BK064850 [1] MAP 389183-389675 KB3781 BK064852 [1] 390592-391084
KB3781 BK064853 [1] 390469-390961
Susie3 BK064851 411879-412371
TRBVBTRBVB TRBVB*01 (26) Kamilah BK064850 [1] MAP 419145-419722 KB3781 BK064852 [1] 420563-421140
KB3781 BK064853 [1] 420428-421005
Susie3 BK064851 441839-442416
TRBVCTRBVC TRBVC*01 (27) Kamilah BK064850 [1] MAP complement(<424673-424761) * KB3781 BK064852 [1] complement(<426090-426178) *
KB3781 BK064853 [1] complement(<425956-426044) *
Susie3 BK064851 complement(<447367-447455) *

✤ : NCBI accession number that correspond to a previously internal IMGT accession number. See the correspondence table.

IMGT notes:
  1. frameshift in L-PART1
  2. STOP-CODON at position 108 (last 3' codon of germline CDR3-IMGT) may disappear during rearrangements
  3. frameshifts in V-REGION: several insertions and deletions
  4. no INIT-CODON: Val instead of Met
  5. no INIT-CODON: Trp instead of Met, frameshifts in V-REGION: several insertions and deletions
  6. STOP-CODON in V-REGION: position 51 and 75, frameshift in V-REGION: deletion of 11nt in FR3-IMGT
  7. frameshift in L-PART1, STOP-CODON in V-REGION: position 51 and 75, frameshift in V-REGION: deletion of 11nt in FR3-IMGT
  8. noncanonical DONOR-SPLICE: gat instead of ngt
  9. frameshift in V-REGION: insertion of 1 nt in FR3-IMGT
  10. noncanonical ACCEPTOR-SPLICE: nacnn instead of nagnn, no CONSERVED-TRP in FR2-IMGT: Arg instead of Trp
  11. noncanonical DONOR-SPLICE: ngc instead of ngt
  12. no 1st-Cys: Tyr instead of Cys, unexpected V-SPACER length: 28 nt instead of 23 nt
  13. frameshifts in V-REGION: deletion of 1 nt and deletion of 1 nt in FR3-IMGT
  14. noncanonical V-HEPTAMER : cagagcg instead of cacagtg
  15. frameshift in V-REGION: deletion of 1 nt in FR3-IMGT
  16. frameshift in V-REGION: deletion of 1 nt in CDR1-IMGT
  17. no L-PART1, frameshift in V-REGION: deletion of 2nt in FR3-IMGT
  18. frameshifts in V-REGION: several deletions
  19. frameshift in V-REGION: insertion of 4 nt in FR1-IMGT
  20. noncanonical V-NONAMER: gtaaacagc instead of gcacaaacc
  21. no INIT-CODON: Thr instead of Met, frameshift in V-REGION: insertion of 1 nt in CDR1-IMGT
  22. noncanonical ACCEPTOR-SPLICE: ntgnn instead of nagnn, no 1st-Cys in FR1-IMGT: Lys instead of Cys, noncanonical V-HEPTAMER: tacggtg instead of cacagtg
  23. truncated L-PART1 in 5' caused by a gap, frameshifts in V-REGION: several insertions and deletions
  24. frameshift in L-PART1, frameshifts in V-REGION: several insert and deletions
  25. no INIT-CODON: His instead of Met, frameshift in L-PART1, frameshift in L-PART2, frameshifts in V-REGION: several deletions
  26. no INIT-CODON: Lys instead of Met, frameshift in L-PART2, frameshifts in V-REGION: several insertions and deletions
  27. no L-PART1, no L-PART2, frameshifts in V-REGION: several insertions and deletions
  28. no INIT-CODON: Thr instead of Met
  29. no INIT-CODON: Leu instead of Met
IMGT references:
  1. Manso,T. et al., IMGT(R) databases, related tools and web resources through three main axes of research and development, Nucleic Acids Res, vol. 50, no. D1, 2022, pp. D1262-D1272. PUBMED: 34875068