IMGT Repertoire (IG and TR)


Gene table: dog (Canis lupus familiaris) TRAC

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT gene name IMGT allele name Fct Chromosomal
localization
T Pr IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Breed Clone names Exons Accession numbers Positions in the sequence Secondary accession numbers Breed Clone names Accession numbers Positions in the sequence
TRAC TRAC*01 F 8 Boxer CM000008.3 EX1 IMGT000004 [1] 738281..738532
EX2 IMGT000004 [1] 740060..740104
EX3 IMGT000004 [1] 740909..741016
EX4UTR (1) IMGT000004 [1] 741823..742367
IMGT notes:
  1. (1) Since EX4 is untranslated, nucleotide differences observed in EX4 are not taken into account for the description of alleles
IMGT references:
  1. [1] Martin J. et al. Immunogenetics 2018 Apr;70(4):223-236 (2018) Sep 19. doi: 10.1007/s00251-017-1028-0. Epub 2017 Sep 19. PMID:28924718
Created:
07/06/2017
Last updated:
22/09/2023
Authors:
Saida Hadi-Saljoqi