IMGT Repertoire (IG and TR)

Fct: FUNCTIONALITY
- F: Functional
- P: Pseudogene
- ORF: Open Reading Frame
T: Transcribed
Pr: Translated into protein

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

Click on:

IMGT gene name to get the corresponding IMGT/GENE-DB entry,
IMGT allele name to see the corresponding Alignments of alleles,
accession number to get the corresponding IMGT/LIGM-DB entry.

IMGT gene name	IMGT allele name	Fct	Chromosomal localization	T	Pr	Positions in the locus	IMGT/LIGM-DB reference sequences						IMGT/LIGM-DB sequences from the literature
IMGT gene name	IMGT allele name	Fct	Chromosomal localization	T	Pr	Positions in the locus	Clone names	Exons	Accession numbers	Positions in the sequence	Secondary accession numbers		Clone names		Accession numbers	Positions in the sequence
	TRAC	TRAC*01	F	14q11.2						Calpha	EX1		X02883	[1]			Calpha	X02592	[2]		c
																	Calpha	M14858	[3]	(1)
																		AE000662	[4]
																		M94081	[5]
																	CM000676.2	IMGT000024				935603-935875
											EX2		X02883	[1]			Calpha	X02592	[2]		c
																	Calpha	M14859	[3]	(1)
																		AE000662	[4]
																		M94081	[5]
																	CM000676.2	IMGT000024				937735-937779
											EX3		X02883	[1]			Calpha	X02592	[2]		c
																	Calpha	M14860	[3]	(1)
																		AE000662	[4]
																		M94081	[5]
																	CM000676.2	IMGT000024				938654-938761
											EX4UTR	(2)	X02883	[1]			Calpha	X02592	[2]		c
																	Calpha	M14861	[3]	(1)
																		AE000662	[4]
																		M94081	[5]
																	CM000676.2	IMGT000024				939702-940229

c: cDNA sequence.

IMGT notes:

(1) From clone lambdaDalpha3 isolated from a B-cell DNA library.
(2) Since EX4 is untranslated, nucleotide differences observed in EX4 are not taken into account for the description of alleles, according to IMGT allele nomenclature and sequence polymorphisms.

IMGT references:

[1] Yoshikai Y. et al., Nature, 316, 837-840 (1985). PMID:2993909
[2] Rabbitts T.H. et al., EMBO J., 4, 1461-1465 (1985). PMID:3875483
[3] Baer R. et al., Mol. Biol. Med., 3, 265-277 (1986). PMID:3016457
[4] Boysen C. et al., Unpublished.
[5] Koop B.F. et al., Genomics, 19, 478-493 (1994). PMID:8188290

More information:

See also (IMGT Scientific chart):

Created:: 22/10/1999
Last updated:: 22/09/2023
Authors:: Géraldine Folch, Viviane Nguefack Ngoune

IMGT Repertoire (IG and TR)

Gene table: human (Homo sapiens) TRAC