IMGT Repertoire (IG and TR)
Locus in genome assembly: human (Homo sapiens) TRA/TRD locus
Human (Homo sapiens) TRA/TRD locus
| IMGT locus | TRA/TRD locus | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| IMGT locus ID: Homsap_TRA/TRD_1 | IMGT locus ID: Homsap_TRA/TRD_2 | IMGT locus ID: Homsap_TRA/TRD_3 | IMGT locus ID: Homsap_TRA/TRD_4 | IMGT locus ID: Homsap_TRA/TRD_5 | IMGT locus ID: Homsap_TRA/TRD_6 | IMGT locus ID: Homsap_TRA/TRD_7 | IMGT locus ID: Homsap_TRA/TRD_8 | IMGT locus ID: Homsap_TRA/TRD_9 | ||
| Taxonomy | Homo sapiens (human), taxon:9606 | Homo sapiens (human), taxon: 9606, isolate: HG01123, haploid (maternal haplotype of diploid), female, B-lymphocyte, ethnicity: Colombian |
Homo sapiens (human), taxon: 9606, isolate: T2T-YAO, haploid (maternal haplotype of diploid), male, blood, ethnicity: Chinese |
Homo sapiens (human), taxon: 9606, isolate: T2T-YAO, haploid (paternal haplotype of diploid), male, blood, ethnicity: Chinese |
Homo sapiens (human), taxon: 9606, isolate: HG02257, haploid (maternal haplotype of diploid), female, B-lymphocyte, ethnicity: African-Caribbean |
Homo sapiens (human), taxon: 9606, isolate: NA24385, haploid (paternal haplotype of diploid), male, B-lymphocyte, ethnicity: Caucasian |
Homo sapiens (human), taxon: 9606, isolate: HG02109, haploid (paternal haplotype of diploid), female, B-lymphocyte, ethnicity: African-Caribbean |
Homo sapiens (human), taxon: 9606, isolate: NA24385, haploid (maternal haplotype of diploid), male, B-lymphocyte, ethnicity: Caucasian |
Homo sapiens (human), taxon: 9606, isolate: HG02148, haploid (maternal haplotype of diploid), female, B-lymphocyte, ethnicity: Peruvian |
|
| Genome assembly | GRCh38.p12 | HG01123_mat_hprc_f2 | T2T_YAO_v2_mat | T2T_YAO_v2_pat | HG02257_mat_hprc_f2 | hg002v1.1.pat | HG02109_pat_hprc_f2 | hg002v1.1.mat | HG02148_mat_hprc_f2 | |
| GenBank assembly ID | GCA_000001405.27 | GCA_018469665.2 | GCA_018466835.2 | GCA_018852605.3 | GCA_018505865.2 | GCA_018852615.3 | GCA_018471535.2 | |||
| RefSeq assembly ID | GCF_000001405.38 | |||||||||
| GWH assembly ID | GWHGEYC00000000.1 | GWHGEYB00000000.1 | ||||||||
| BAC library | ||||||||||
| Chromosome | 14 | 14q11.2 | 14 | 14 | 14q11.2 | 14q11.2 | 14q11.2 | 14q11.2 | 14q11.2 | |
| Chromosome sequence ID and locus positions (GenBank assembly) | CM000676.2 (21611904-22562132) | CM089104.1 (14172343-15122885) | CM089267.1 (17220535-18171046) | CP139552.2 (21313924-22199948) | CM092168.1 (17441604-18390631) | CP139529.2 (23562448-24513851) | CM088031.1 (13185164-14135474) | |||
| Chromosome sequence ID and locus positions (RefSeq assembly) | NC_000014.9 (21611904-22562132) | |||||||||
| Chromosome sequence ID and locus positions (GWH assembly) | GWHGEYC00000014.1 (15416105-16366605) | GWHGEYB00000014.1 (16181836-17132353) | ||||||||
| IMGT locus orientation on the chromosome | FWD | FWD | FWD | FWD | FWD | FWD | FWD | FWD | FWD | |
| IMGT/LIGM-DB locus reference sequence (ID) | IMGT000024 | IMGT000290 | IMGT000292 | IMGT000309 | IMGT000313 | IMGT000321 | IMGT000323 | IMGT000327 | IMGT000333 | |
| IMGT/LIGM-DB locus reference sequence length (bp) | 950229 | 950543 | 950501 | 950518 | 950512 | 886025 | 949028 | 951404 | 950311 | |
More information:
- Gene table: human (Homo sapiens) TRAV
- Gene table: human (Homo sapiens) TRAJ
- Gene table: human (Homo sapiens) TRAC
- Gene table: human (Homo sapiens) TRDV
- Gene table: human (Homo sapiens) TRDD
- Gene table: human (Homo sapiens) TRDJ
- Gene table: human (Homo sapiens) TRDC
- Potential germline repertoire: human (Homo sapiens) TRAV genes on chromosome 14
- Potential germline repertoire: human (Homo sapiens) TRDV genes on chromosome 14
- Created:
- 19/02/2019
- Last updated:
- 07/04/2026
- Authors:
- Nguefack Ngoune Viviane, Mia Cherkaoui
