IMGT Repertoire (IG and TR)


Locus in genome assembly: house mouse (Mus Musculus) IGL locus

House mouse (Mus Musculus) IGL locus

IMGT locus IGL locus IGL locus IGL locus IGL locus
IMGT locus ID: Musmus_IGL_1 IMGT locus ID: Musmus_IGL_2 IMGT locus ID: Musmus_IGL_3 IMGT locus ID: Musmus_IGL_4
Taxonomy Mus musculus (House mouse),
taxon: 10090
Mus musculus (House mouse),
taxon: 10090
Mus musculus (House mouse),
taxon: 10090
Mus musculus (House mouse),
taxon: 10090
Strain: C57BL/6J Strain: BALB/cJ Strain: DBA/2J Strain: NOD/SCID
Genome assembly GRCm39 BALB_cJ_v3 DBA_2J_v3 NOD_SCID
GenBank assembly ID GCA_000001635.9 GCA_921997145.2 GCA_921998315.2 GCA_031763685.1
RefSeq assembly ID GCF_000001635.27
BAC library
Chromosome 16 16 16 16
Chromosome sequence ID and locus positions (GenBank assembly) CM001009.3 (18870505..19089444, complement) OW971652.1 (15666833..15885188, complement) OW971820 (15772457..15990745, complement) Super-Scaffold_61_1: JARLJY010000017.1 (17225396-17006467, complement)
Chromosome sequence ID and locus positions (RefSeq assembly) NC_000082.7
IMGT locus orientation on the chromosome REV REV REV REV
IMGT/LIGM-DB locus reference sequence (ID) IMGT000117 IMGT000126 IMGT000134 IMGT000211
IMGT/LIGM-DB locus reference sequence length (bp) 218940 218356 218289 218930
Created:
06/10/2022
Last updated:
23/01/2025
Authors:
Yascim Kamel, Anna Tran, Ifigeneia Sideri