IMGT Repertoire (IG and TR)
Locus in genome assembly: house mouse (Mus Musculus) IGL locus
House mouse (Mus Musculus) IGL locus
| IMGT locus | IGL locus | IGL locus | IGL locus | IGL locus |
|---|---|---|---|---|
| IMGT locus ID: Musmus_IGL_1 | IMGT locus ID: Musmus_IGL_2 | IMGT locus ID: Musmus_IGL_3 | IMGT locus ID: Musmus_IGL_4 | |
| Taxonomy | Mus musculus (House mouse), taxon: 10090 |
Mus musculus (House mouse), taxon: 10090 |
Mus musculus (House mouse), taxon: 10090 |
Mus musculus (House mouse), taxon: 10090 |
| Strain: C57BL/6J | Strain: BALB/cJ | Strain: DBA/2J | Strain: NOD/SCID | |
| Genome assembly | GRCm39 | BALB_cJ_v3 | DBA_2J_v3 | NOD_SCID |
| GenBank assembly ID | GCA_000001635.9 | GCA_921997145.2 | GCA_921998315.2 | GCA_031763685.1 |
| RefSeq assembly ID | GCF_000001635.27 | |||
| BAC library | ||||
| Chromosome | 16 | 16 | 16 | 16 |
| Chromosome sequence ID and locus positions (GenBank assembly) | CM001009.3 (18870505..19089444, complement) | OW971652.1 (15666833..15885188, complement) | OW971820 (15772457..15990745, complement) | Super-Scaffold_61_1: JARLJY010000017.1 (17225396-17006467, complement) |
| Chromosome sequence ID and locus positions (RefSeq assembly) | NC_000082.7 | |||
| IMGT locus orientation on the chromosome | REV | REV | REV | REV |
| IMGT/LIGM-DB locus reference sequence (ID) | IMGT000117 | IMGT000126 | IMGT000134 | IMGT000211 |
| IMGT/LIGM-DB locus reference sequence length (bp) | 218940 | 218356 | 218289 | 218930 |
More information:
- Created:
- 06/10/2022
- Last updated:
- 23/01/2025
- Authors:
- Yascim Kamel, Anna Tran, Ifigeneia Sideri
