IMGT Repertoire (IG and TR)


Correspondence between nomenclatures: Teleostei IGIC

Correspondence between IMGT gene names and clone names is available in Gene tables: Teleostei

Correspondence between the different chain type nomenclatures

Light chain types in Teleostei are designated as IG-Light-Iota. There are four IG-Light-Iota chain types depending from the IGIC subgroup (IGIC1 to IGIC4) to which belong to the C-GENEs.

It is not yet known if the four subgroups are present in all Teleostei species.

IMGT chain types Corresponding IMGT subgroup Chain types in the literature
Atlantic cod (Gadus morhua) Atlantic salmon (Salmo salar) Channel catfish (Ictalurus punctatus) Chinese perch (Siniperca chuatsi) Common carp (Cyprinus carpio) European sea bass (Dicentrarchus labrax) Five-ray yellowtail (Seriola quinqueradiata) Rainbow trout (Oncorhynchus mykiss) Spotted wolffish (Anarhichas minor) Three spined stickleback (Gasterosteus aculeatus) Zebrafish (Danio rerio)
IG-Light-Iota-1 IGIC1 L1 [1] L1/L3 [3] G [4] L [12] L1A/L1B [6] L [7] L [8] L1 [1] L1/L2 [10] L1 [14] L1 [11]
IG-Light-Iota-2 IGIC2 L2 [3] L2 [13] L2 [9] L2 [11]
IG-Light-Iota-3 IGIC3 F [5] L3 [6] L3 [11]
IG-Light-Iota-4 IGIC4 L2 [2]
IMGT references:
  1. [1] Daggfeldt, A. et al., Immunogenetics, 38, 199-209 (1993).
  2. [2] Wermenstam, N.E. and Pilstrom, L., unpublished (2000).
  3. [3] Solem, S.T. and Jorgensen, T., Dev. Comp. Immunol., 26, 635-647 (2002).
  4. [4] Ghaffari, S.H. and Lobb, C.J., J. Immunol., 151, 6900-6912 (1993).
  5. [5] Ghaffari, S.H. and Lobb, C.J., J. Immunol., 159, 250-258 (1997).
  6. [6] Tomana, M. et al., Immunogenetics, 54, 120-129 (2002).
  7. [7] Dos Santos, N.M. et al., Dev. Comp. Immunol., 25, 387-401 (2001).
  8. [8] Okamoto, K. et al., Fish Shellfish Immunol., 14, 55-70 (2003).
  9. [9] Partula, S., et al., Immunogenetics, 45, 44-51 (1996).
  10. [10] Espelid, S. et al., Fish Shellfish Immunol., 11, 399-413 (2001).
  11. [11] Haire, R.N. et al., Immunogenetics, 51, 915-923 (2000).
  12. [12] Zhang, Y.A. et al., Vet. Immunol. Immunopathol., 95, 81-90 (2003).
  13. [13] Ishikawa, J. et al., unpublished (2003).
  14. [14] Haas-Assenbaum, A. et al., unpublished (2003).
See also:
Created:
26/02/2003
Last updated:
22/09/2023
Authors:
Nathalie Bosc