IMGT Repertoire (RPI)

Protein display of C-LIKE-DOMAIN (proteins other than IG or TR): Homo sapiens PRETA

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      PRETA
      genes
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                                  1       10        20
                                  ....|....|....|....|
  AF084941  ,PRETA1 EX1          MAGTWLLLLLALGCPALPT


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      PRETA
      genes
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                                                 A        AB     B          BC         C     CD      D          DE           E      EF   F            FG          G
                                              (1-15)          (16-26)    (27-38)    (39-45)       (77-84)                 (85-96)     (97-104)    (105-117)  (118-128)
                                         ———————————————>   ——————————>             ——————>       ———————>              ———————————>  ———————>               ——————————>
                                         1         10  15   16  20 2326 27      36  3941 45       77 80 84              85  89    96  97   104  105      117 118     128
                                87654321 | ........|....|123|...|..|..| |........|  |.|...|1234567|..|...|12345677654321|...|......|12|......| |...........| |.........|
  AF084941  ,PRETA1 EX2          (G)VGGT P FPSLAPPIMLLVDG...KQQMVVVCLVL DVAPP.GLDS  PIWFSAGNGSAL..DAFTYGPSPATD......GTWTNLAHLSLPSEEL..ASWEPLVC HTGPGA.EGHSRS TQPMHLS



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      PRETA
      genes
_____________________________________________________________________________________________________________________________________________________________________________________________

                                  1        10        20
                                  . ...|....|....|....|
  AF084941  ,PRETA1 EX3          (G)EASTARTCPQEPLR



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      PRETA
      genes
_____________________________________________________________________________________________________________________________________________________________________________________________

                                  1        10        20        30        40        50        60        70        80        90       100       110       120       130       140
                                  . ...|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
  AF084941  ,PRETA1 EX4          (G)TPGGALWLGVLRLLLFKLLLFDLLLTCSCLCDPAGPLPSPATTTRLRALGSHRLHPATETGGREATSSPRPQPRDRRWGDTPPGRKPGSPVWGEGSYLSSYPTCPAQAWCSRSRLRAPSSSLGAFFAGDLPPPLQAGAA

Legend:

• This protein display shows examples of C-DOMAINs (IG and TR) and C-LIKE-DOMAINs (proteins other than IG or TR).
• Dots indicate gaps according to the IMGT unique numbering for C-DOMAIN and C-LIKE-DOMAIN.
• N-glycosylation sites (NXS/T, where X is different from P) are underlined.
• Letters in red correspond to amino acids which are polymorphic in the other alleles.

See also:

• IMGT Repertoire:
  • Protein display: C-DOMAIN (IG and TR) and C-LIKE-DOMAIN (proteins other than IG or TR)
• IMGT Scientific chart:
• The protein display numbering is according to the IMGT unique numbering for for C-DOMAIN and C-LIKE-DOMAIN.
• Colors are according to IMGT color menu for genes.

Created: 25/04/2003
Last updated:
Authors: Elodie Gemrot and Dominique Scaviner

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