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IMGT/3Dstructure-DB

IMGT/3Dstructure-DB [1-5] is part of IMGT, the international ImMunoGeneTics information system® http://www.imgt.org [6].

IMGT/3Dstructure-DB, created by LIGM (Université Montpellier II, CNRS), is the IMGT 3D structure database, on the Web since November 2001.

IMGT/3Dstructure-DB contains information on the sequences, 2D structures (or Colliers de Perles) and 3D structures of IG, TR and MHC and related proteins of the immune system (RPI) with known 3D structures, from human and other vertebrate species. Experimental 3D data are from PDB. Expertly annotated information is provided according to the IMGT-ONTOLOGY concepts and to the IMGT Scientific chart rules.

Click here for Correspondence between labels for IG and TR domains in IMGT/3Dstructure-DB and IMGT/LIGM-DB.

Citing IMGT:
Lefranc, M.-P., "IMGT, the international ImMunoGeneTics database®" Nucleic Acids Res., 31, 307-310 (2003) PMID: 12520009

Citing IMGT/3Dstructure-DB:
Kaas, Q., Ruiz, M. and Lefranc, M.-P., "IMGT/3Dstructure-DB and IMGT/StructuralQuery, a database and a tool for immunoglobulin, T cell receptor and MHC structural data" Nucleic Acids Res., 32, D208-210 (2004) PMID: 14681396

NAR summary:
Kaas, Q., Ruiz, M. and Lefranc, M.-P. IMGT/3Dstructure-DB (2003), In: Database Listing


References:
[1] Ruiz, M. and Lefranc, M.-P. "IMGT sequence profile: a standardized visualization for the immunoglobulin and T cell receptor V-REGIONs applicable to other protein alignments" Currents in Computational Molecular Biology, Frontiers Science Series n°30, Universal Academy Press, Tokyo, 126-127 (2000)
[2] Ruiz, M. "Analyse bioinformatique standardisée IMGT des relations séquence-structure des immunoglobulins et des récepteurs T", Thèse de doctorat, Université Montpellier II, 2001
[3] Ruiz, M. and Lefranc, M.-P., Immunogenetics DOI 10.1007/s00251-001-0408-6 (on line 30/01/2002) Immunogenetics, 53, 857-883 (2002) PMID: 11862387, LIGM:259.
[4] Kaas, Q. and Lefranc, M.-P., European Conference on Computational Biology, ECCB2002, P72 (Saarbrücken, Germany, 6-9 October 2002)
Published in Database of Poster Abstracts, Abstract P72
[5] Kaas, Q., Ruiz, M. and Lefranc, M.-P., Nucleic Acids Res., 32, D208-210 (2004) PMID: 14681396, LIGM:281.
[6] Lefranc, M.-P., Nucleic Acids Res., 31, 307-310 (2003), PMID: 12520009, LIGM:267