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Relative position (order) of a gene, in a locus from the 5' end of a locus to its 3' end. The number '0' indicates that the relative position is unknown.

Western lowland gorilla (Gorilla gorilla gorilla) IGK locus

IMGT gene name Functionality IMGT gene order
IMGT locus ID: Gorgor_IGK_1
Genome assembly: Kamilah_GGO_V0		 IMGT gene order
IMGT locus ID: Gorgor_IGK_2
Genome assembly: Susie3		 IMGT gene order
IMGT locus ID: Gorgor_IGK_3
Genome assembly:
NHGRI_mGorGor1-v1.1-0.2.freeze_mat		 IMGT gene order
IMGT locus ID: Gorgor_IGK_4
Genome assembly:
NHGRI_mGorGor1-v1.1-0.2.freeze_pat		 IMGT gene orientation in locus Copy Number Variation (CNV) Haplotypes
IGKV1-49 F 1 1 1 1 direct
IGKV3-48 P 2 2 2 2 direct
IGKV2-47 P 3 3 3 3 direct
IGKV2-46 ORF 4 4 4 4 direct
IGKV2-45 F P 5 5 5 5 direct
IGKV1-44 ORF P 6 6 6 6 direct
IGKV2-40 P F 7 7 7 7 direct
IGKV1-39 F 8 8 8 8 direct
IGKV2-38 P 9 9 9 9 direct
IGKV1-37 F 10 10 10 10 direct
IGKV2-36 P 11 11 11 11 direct
IGKV1-35 P 12 12 12 12 direct
IGKV3-34 P 13 13 13 13 direct
IGKV1-33 F 14 14 14 14 direct
IGKV1-32 P 15 15 15 15 direct
IGKV3-31 P 16 16 16 16 direct
IGKV2-30 F 17 17 17 direct
IGKV2-29 P F 18 18 18 direct
IGKV2-24 F 19 19 19 19 direct
IGKV2-23 P 20 20 20 20 direct
IGKV1-22 P 21 21 21 21 direct
IGKV6-21 F 22 22 22 22 direct
IGKV3-20 F 23 23 23 23 direct
IGKV2-19 P 24 24 24 24 direct
IGKV2-18 P 25 25 25 25 direct
IGKV6-41 ORF 26 26 26 26 direct
IGKV1-17 F 27 27 27 27 direct
IGKV1-16 F 28 (1) direct
IGKV3-15 F 29 29 29 29 direct
IGKV2-14 P 30 30 30 30 direct
IGKV1-13 F 31 31 31 31 direct
IGKV1-12 F 32 32 32 32 direct
IGKV3-11 F 33 33 33 33 direct
IGKV2-10 P 34 34 34 34 direct
IGKV1-42 F P 35 35 35 35 direct
IGKV1-43 F 36 36 36 36 direct
IGKV1-8 F 37 37 37 37 direct
IGKV3-7 F 38 38 38 38 direct
IGKV1-6 F 39 39 39 39 direct
IGKV1-5 F P 40 40 40 40 direct
IGKV2-4 P 41 41 41 41 direct
IGKV7-3 F 42 42 42 42 direct
IGKV5-2 F 43 43 43 43 opposite
IGKV4-1 F P 44 44 44 44 opposite
IGKJ1 F 45 45 45 45 direct
IGKJ2 F 46 46 46 46 direct
IGKJ3 F 47 47 47 47 direct
IGKJ4 F 48 48 48 48 direct
IGKJ5 F 49 49 49 49 direct
IGKC F 50 50 50 50 direct
IMGT notes:
  1. (1) The gene is additional in the NHGRI_mGorGor1-v1.1-0.2.freeze_mat assembly (IMGT000137 accession number) compare to the Kamilah_GGO_v0 assembly (IMGT000077).
Created:
28/04/2022
Last updated:
05/06/2023
Authors:
Chahrazed Debbagh