IMGT Repertoire (IG and TR)


Locus in genome assembly: Sumatran orangutan (Pongo abelii) IGH locus

Sumatran orangutan (Pongo abelii) IGH locus

IMGT locus IGH locus IGH locus IGH locus
IMGT locus ID: Ponabe_IGH_1 IMGT locus ID: Ponabe_IGH_2 IMGT locus ID: Ponabe_IGH_3
Taxonomy Pongo abelii (Sumatran orangutan), taxon:9601, isolate: Susie Pongo abelii (Sumatran orangutan), taxon:9601, isolate: AG06213 Pongo abelii (Sumatran orangutan), taxon:9601, isolate: AG06213
Genome assembly Susie_PABv2 NHGRI_mPonAbe1-v1.1-hic.freeze_pri NHGRI_mPonAbe1-v1.1-hic.freeze_alt
GenBank assembly ID GCA_002880775.3 GCA_028885655.2 GCA_028885685.2
RefSeq assembly ID GCF_002880775.1(1) GCF_028885655.2
BAC library
Chromosome 14 14 14
Chromosome sequence ID and locus positions (GenBank assembly) CM009276.2 (87402090..88963417, complement) CM054693.1 (84472489..85964851, complement) CM054670.1 (84495848..86094908, complement)
Chromosome sequence ID and locus positions (RefSeq assembly) NC_036917.1 (87402090..88963417, complement) NC_071999.1 (84472489..85964851, complement)
IMGT locus orientation on the chromosome REV REV REV
IMGT/LIGM-DB locus reference sequence (ID) IMGT000122 IMGT000155 IMGT000156
IMGT/LIGM-DB locus reference sequence length (bp) 1561328 1492363 1599061
IMGT notes:
  1. (1) RefSeq GCF_002880775.1 has been suppressed.
Created:
02/11/2023
Last updated:
13/08/2024
Authors:
Shamsa Batool