IMGT Repertoire (IG and TR)

Collier de Perles: human (Homo sapiens) IGHC

IGHG3*01 CH3 (D78345)

Polymorphisms:

  • IGHG3*03 (X16110): V 84, R 88, E 98, V 101
  • IGHG3*06 (AJ390237): K 79
  • IGHG3*07 (AJ390238): K 79
  • IGHG3*08 (AJ390241): N 44
  • IGHG3*13 (AJ390244): K 79, E 98
  • IGHG3*14 (AJ390254): N 44, Y 116
  • IGHG3*15 (AJ390260): N 44, K 79, Y 116
  • IGHG3*16 (AJ390262): N 44, Y 116
  • IGHG3*17 (AJ390272): M 37, K 79, V 84, H 115, Y 116
  • IGHG3*18 (AJ390276): M 37, K 79, V 84, H 115, Y 116
  • IGHG3*19 (AJ390279): M 37, K 79, V 84, H 115, Y 116
  • IGHG3*20 (MG920256): N 44, R 45.2, Y 116
  • IGHG3*22 (MG920254): N 44, H 115, Y 116
  • IGHG3*23 (MH025837): K 79, V 84, H 115, Y 116
  • IGHG3*24 (MG920257): N 44, K 79, Y 116
  • IGHG3*25 (MG920258): N 44, Y 116
  • IGHG3*27 (MG920260): N 44, Y 116
  • IGHG3*29 (MG920261): N 44, Y 116

On one layer

On two layers

Colors are according to IMGT Color menu for sequence alignments and Color menu for CDR-IMGT

Legend:
  • Amino acids are shown in the one-letter abbreviation.
  • Hydrophobic amino acids (hydropathy index with positive value) and Tryptophan (W) found at a given position in more than 50% of analysed IG and TR sequences are shown in blue.
  • All Proline (P) are shown in yellow.
  • Missing positions in IMGT Colliers de Perles based on 3D structures may be due to incomplete experimental data.
  • Arrows indicate the direction of the beta sheets and their different designations in 3D structures. This information has to be used carefully if not supported by experimental data.
  • The positions 26, 39 and 104 are shown in squares by homology with the corresponding positions in the V-REGIONs. Positions 45 and 77 which delimit the characteristic "CD" strand of the C-DOMAINs, and position 118 which corresponds structurally to J-PHE or J-TRP of the J-REGION, are also shown in squares.
  • Hatched circles or squares correspond to missing positions according to the IMGT unique numbering for C-DOMAINs (Lefranc et al. 2005 PMID: 15572068 PDF).
  • In green, position of amino acid changes involved in allotype polymorphism.
  • Strands of the beta-pleated sheet localized at the interface between domains are shown in bold.
  • The hinge six amino acids which belongs to the same exon as the CH2 domain are not shown.
  • The CHS region is not shown.
See also:
Created:
23/02/2011
Last updated:
Wednesday, 23-Oct-2024 09:53:41 CEST
Authors:
François Ehrenmann, Chantal Ginestoux and Patrice Duroux