IMGT Repertoire (IG and TR)

Locus representation: dog (Canis lupus familiaris) TRA/TRD

Citing this page: Martin J. et al. Immunogenetics 70, 223-236 (2018) PMID: 28924718
IMGT/LIGM-DB: IMGT000004 (743295 bp), dog (Canis lupus familiaris) TRA/TRD locus on the chromosome 8

Dog (Canis lupus familiaris) TRA/TRD locus on chromosome 8

The orientation of the dog (Canis lupus familiaris) TRA/TRD locus on the chromosome 8 is forward (FWD).

Locus representation dog TRA/TRD

Legend:
Colors are according to IMGT color menu for genes.
The boxes representing the genes are not to scale. Exons are not shown.
A double slash // indicates a gap in genome assembly. Distances in bp (base pair) or in kb (kilobase) associated with a double slash are taken into account in the length of the lines and included in the numbers displayed at the right end of the lines.
A dotted line ... indicates the distance in kb (kilobase) between the locus and its bornes (5' borne and the most 5' gene in the locus and/or 3' borne and the most 3' gene in the locus) on the top and bottom lines, respectively. These distances are not represented at scale and/or are not included in IMGT-LOCUS-UNIT and may not be included in the numbers displayed at the right ends of these two lines .

TRA and TRD gene names are according to the IMGT nomenclature [2].
Single arrows show genes whose polarity is opposite to that of the D-J-C-CLUSTER comprising IGHD (D1 to D2)- TRDJ (DJ1 to DJ4)-TRDC and that of the J-C-CLUSTER comprising TRAJ (J1 to J61)-TRAC

Zoom for TRA J-C-CLUSTER

zoom

IMGT references:
  1. [1] Martin J. et al. Immunogenetics 2018 Apr;70(4):223-236 (2018) Sep 19. doi: 10.1007/s00251-017-1028-0. Epub 2017 Sep 19. PMID:28924718
  2. [2] Lefranc M-P. Front Immunol. 2014 Feb 05;5:22. doi: 10.3389/fimmu.2014.00022. Open access. PMID:24600447
Created:
19/09/2017
Last updated:
22/09/2023
Authors:
Saida Hadi-Saljoqi