IMGT Repertoire (IG and TR)
Locus gene order: American mink (Neogale vison) IGH locus
Relative position (order) of a gene, in a locus from the 5' end of a locus to its 3' end. The number '0' indicates that the relative position is unknown.
American mink (Neogale vison) IGH locus
| IMGT gene name | Functionality | IMGT gene order IMGT locus ID: Neovis_IGH_1 Genome assembly: GCA_020171115.1 |
IMGT gene orientation in locus | Copy Number Variation (CNV) | Haplotypes |
|---|---|---|---|---|---|
| IGHV3-40 | P | 1 | direct | ||
| IGHV7-39 | P | 2 | direct | ||
| IGHV3-38 | F | 3 | direct | ||
| IGHV3-37 | P | 4 | direct | ||
| IGHV3-36 | P | 5 | direct | ||
| IGHV3-35 | F | 6 | direct | ||
| IGHV3-34 | F | 7 | direct | ||
| IGHV3-33 | P | 8 | direct | ||
| IGHV3-32 | P | 9 | direct | ||
| IGHV3-31 | F | 10 | direct | ||
| IGHV3-30 | F | 11 | direct | ||
| IGHV(II)-29 | P | 12 | direct | ||
| IGHV3-28 | P | 13 | direct | ||
| IGHV3-27 | F | 14 | direct | ||
| IGHV3-26 | F | 15 | direct | ||
| IGHV3-25 | F | 16 | direct | ||
| IGHV(II)-24 | P | 17 | direct | ||
| IGHV3-23 | P | 18 | direct | ||
| IGHV1-22 | F | 19 | direct | ||
| IGHV3-21 | P | 20 | direct | ||
| IGHV3-20 | P | 21 | direct | ||
| IGHV1-19 | F | 22 | direct | ||
| IGHV7-18 | F | 23 | direct | ||
| IGHV3-17 | F | 24 | direct | ||
| IGHV3-16 | P | 25 | direct | ||
| IGHV1-15 | P | 26 | direct | ||
| IGHV3-14 | F | 27 | direct | ||
| IGHV3-11N | P | 28 | direct | ||
| IGHV7-10N | F | 29 | direct | ||
| IGHV3-9N | F | 30 | direct | ||
| IGHV3-13 | F | 31 | direct | ||
| IGHV3-11D | P | 32 | direct | ||
| IGHV7-10D | F | 33 | direct | ||
| IGHV3-9D | F | 34 | direct | ||
| IGHV3-12 | F | 35 | direct | ||
| IGHV3-11 | P | 36 | direct | ||
| IGHV7-10 | F | 37 | direct | ||
| IGHV3-9 | F | 38 | direct | ||
| IGHV3-8 | P | 39 | opposite | ||
| IGHV(II)-7 | P | 40 | direct | ||
| IGHV3-6 | P | 41 | direct | ||
| IGHV3-5 | F | 42 | direct | ||
| IGHV3-4 | P | 43 | direct | ||
| IGHV3-3 | F | 44 | direct | ||
| IGHV3-2 | F | 45 | direct | ||
| IGHV4-1 | F | 46 | direct | ||
| IGHD1 | ORF | 47 | direct | ||
| IGHD2 | F | 48 | direct | ||
| IGHD3 | ORF | 49 | direct | ||
| IGHD4 | ORF | 50 | direct | ||
| IGHD5 | F | 51 | direct | ||
| IGHD6 | ORF | 52 | direct | ||
| IGHD7 | ORF | 53 | direct | ||
| IGHD8 | F | 54 | direct | ||
| IGHD9 | ORF | 55 | direct | ||
| IGHD10 | ORF | 56 | direct | ||
| IGHJ1 | F | 57 | direct | ||
| IGHJ2 | ORF | 58 | direct | ||
| IGHJ3 | ORF | 59 | direct | ||
| IGHJ4 | F | 60 | direct | ||
| IGHJ5 | ORF | 61 | direct | ||
| IGHJ6 | F | 62 | direct | ||
| IGHM | F | 63 | direct | ||
| IGHD | F | 64 | direct | ||
| IGHG2 | F | 65 | direct | ||
| IGHG4 | F | 66 | direct | ||
| IGHE | F | 67 | direct | ||
| IGHA | F | 68 | direct |
More information:
See also:
- Created:
- 04/07/2024
- Last updated:
- 02/10/2024
- Authors:
- Arthur Appelgren, Ariadni Papadaki ,Maria Georga
