IMGT locus | TRG locus | TRG locus | TRG locus | TRG locus |
---|---|---|---|---|
IMGT locus ID: Hetgla_TRG_1_contig_only | IMGT locus ID: Hetgla_TRG_2_scaffold_only | IMGT locus ID: Hetgla_TRG_3 | IMGT locus ID: Hetgla_TRG_4 | |
Taxonomy | Heterocephalus glaber (naked mole-rat), taxon:10181, isolate: MEF-2018, pooled male and female | Heterocephalus glaber (naked mole-rat), taxon:10181, isolate: NMR 29, female | Heterocephalus glaber (naked mole-rat), taxon:10181, male | Heterocephalus glaber (naked mole-rat), taxon:10181, male |
Genome assembly | Heter_glaber.v1.7_hic_pac | HetGla_female_1.0 | Naked mole-rat paternal | Naked mole-rat maternal |
GenBank assembly ID | GCA_014060925.1 | GCA_000247695.1 | GCA_944319725.1 | GCA_944319715.1 |
RefSeq assembly ID | GCF_000247695.1 | |||
Chromosome | 1 | 1 | ||
Chromosome sequence ID and locus positions (GenBank assembly) | OX090941.1 15517478-5857890 |
OX090909.1 44357246-44690455 |
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Chromosome sequence ID and locus positions (RefSeq assembly) | ||||
IMGT locus orientation on the chromosome | forward (FWD) | forward (FWD) | ||
IMGT/LIGM-DB locus reference sequence (ID) | BK064755 | BK064756 | ||
IMGT/LIGM-DB locus reference sequence length (bp) | 340413 | 333210 | ||
Scaffold | IMGT000072 | IMGT000083 | ||
Scaffold ID | RPGA01000026.1 | NW_004624740 | ||
Scaffold length | 337036 | 400455 | ||
Scaffold sequence ID and locus contig positions (GenBank assembly) | RPGA01000026.1 (10831321-11168357) |
NW_004624740 (22668860-23069314) |