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Naked mole-rat (Heterocephalus glaber) TRG locus

IMGT locus TRG locus TRG locus
IMGT locus ID: Hetgla_TRG_1_contig_only IMGT locus ID: Hetgla_TRG_2_scaffold_only
Taxonomy Heterocephalus glaber (naked mole-rat), taxon:10181, isolate: MEF-2018, pooled male and female Heterocephalus glaber (naked mole-rat), taxon:10181, isolate: NMR 29, female
Genome assembly Heter_glaber.v1.7_hic_pac HetGla_female_1.0
GenBank assembly ID GCA_014060925.1 GCA_000247695.1
RefSeq assembly ID nd GCF_000247695.1
Scaffold IMGT000072 IMGT000083
Scaffold ID RPGA01000026.1 NW_004624740
Scaffold length 337036 400455
Scaffold sequence ID and locus contig positions (GenBank assembly) RPGA01000026.1 (10831321-11168357) NW_004624740 (22668860-23069314)
Chromosome nd nd
Chromosome sequence ID and locus positions (GenBank assembly) nd nd
Chromosome sequence ID and locus positions (RefSeq assembly) nd nd
IMGT locus orientation on the chromosome nd nd
IMGT/LIGM-DB locus reference sequence (ID) nd nd
IMGT/LIGM-DB locus reference sequence length (bp) nd nd

Provisional nomenclature (scaffolds only, no chromosome assembly).

IMGT notes:
  1. (1) In IMGT000083, only new genes and new alleles compared to IMGT000072 are annotated.
Created:
04/10/2021
Last updated:
13/10/2021
Authors:
Alexandre Albani, Gérard Lefranc, Sofia Kossida, Marie-Paule Lefranc