IMGT Repertoire (IG and TR)
Locus in genome assembly: Sumatran orangutan (Pongo abelii) TRB locus
Sumatran orangutan (Pongo abelii) TRB locus
| IMGT locus | TRB locus | TRB locus | TRB locus | TRB locus | ||
|---|---|---|---|---|---|---|
| IMGT locus ID: Ponabe_TRB_1 | IMGT locus ID: Ponabe_TRB_2 | IMGT locus ID: Ponabe_TRB_3 | IMGT locus ID: Ponabe_TRB_4 | |||
| Taxonomy | Pongo abelii (Sumatran orangutan), taxon:9601, isolate: AG06213 | Pongo abelii (Sumatran orangutan), taxon:9601, isolate: AG06213 | Pongo abelii (Sumatran orangutan), taxon:9601, isolate: Susie | Pongo abelii (Sumatran orangutan), taxon:9601, isolate: Susie | ||
| Genome assembly | NHGRI_mPonAbe1-v2.0_pri | NHGRI_mPonAbe1-v2.0_alt | Susie_PAB_hifiasm-v0.15.2.pri | Susie_PAB_hifiasm-v0.15.2.alt | ||
| GenBank assembly ID | GCA_028885655.2 | GCA_028885685.2 | GCA_030170355.1 | GCA_030170345.1 | ||
| RefSeq assembly ID | GCF_028885655.2 | |||||
| BAC library | ||||||
| Chromosome | 6 | 6 | ||||
| Chromosome sequence ID and locus positions (GenBank assembly) | CM054685.2 (139727282-1404303387) | CM054662.2 (143833594-144577368) | JARRAK010000001.1 (16492808..17199941, complement) | JARRAL010000019.1 (16516675..17220602, complement) | ||
| Chromosome sequence ID and locus positions (RefSeq assembly) | NC_071991.2 (139727282-1404303387) | |||||
| IMGT locus orientation on the chromosome | FWD | FWD | REV | REV | ||
| IMGT/LIGM-DB locus reference sequence (ID) | IMGT000250 | IMGT000254 | IMGT000269 | IMGT000270 | ||
| IMGT/LIGM-DB locus reference sequence length (bp) | 703057 | 743775 | 707134 | 703928 |
More information:
- Created:
- 25/03/2025
- Last updated:
- 25/04/2025
- Authors:
- Shamsa Batool, Fayçall Dekkar
