IMGT Repertoire (RPI)
Alignment of alleles: Human IGLL1
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Accession Allele EXON 1
number name
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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20
M R P G T G Q G G L E A P G E P G P N L
M27749 , IGLL1*01 (cDNA) (EX1) ATG AGG CCA GGG ACA GGC CAG GGG GGC CTT GAG GCC CCT GGT GAG CCA GGC CCC AAC CTC
AP000345, IGLL1*02 (1) --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
BC012293, IGLL1*02 (cDNA) --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
M34511 , IGLL1*02 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40
R Q R W P L L L L G L A V V T H G L L R
M27749 , IGLL1*01 (cDNA) (EX1) AGG CAG CGC TGG CCC CTG CTG CTG CTG GGT CTG GCC GTG GTA ACC CAT GGC CTG CTG CGC
AP000345, IGLL1*02 (1) --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
BC012293, IGLL1*02 (cDNA) --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
M34511 , IGLL1*02 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60
P T A A S Q S R A L G P G A P G G S S R
M27749 , IGLL1*01 (cDNA) (EX1) CCA ACA GCT GCA TCG CAG AGC AGG GCC CTG GGC CCT GGA GCC CCT GGA GGA AGC AGC CGG
AP000345, IGLL1*02 (1) --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
BC012293, IGLL1*02 (cDNA) --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
M34511 , IGLL1*02 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
61 62 63 64 65 66 67 68
S S L R S R W G
M27749 , IGLL1*01 (cDNA) (EX1) (2) TCC AGC CTG AGG AGC CGG TGG GGC AG
AP000345, IGLL1*02 (1) --- --- --- --- --- --- --- --- --
BC012293, IGLL1*02 (cDNA) --- --- --- --- --- --- --- --- --
M34511 , IGLL1*02 --- --- --- --- --- --- --- --- --
___________________________________________________________________________________________________________________________________ Accession Allele EXON 2 number name ___________________________________________________________________________________________________________________________________ 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 R F L L Q R G S W T G P R C W P R G F Q M27749 , IGLL1*01 (cDNA) (EX2) G TTC CTG CTC CAG CGC GGC TCC TGG ACT GGC CCC AGG TGC TGG CCC CGG GGG TTT CAA AP000345, IGLL1*02 (1) - --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- BC012293, IGLL1*02 (cDNA) - --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- M34512 , IGLL1*02 - --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- M12811 , IGLL1*02 --- --- --- M34514 , IGLL1*03 - --- --- --- --- --- --- --- --- --- --- --- G-- --- --- --- --- --- --- --- 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 S K H N S V T H V F G S G T Q L T V L M27749 , IGLL1*01 (cDNA) (EX2) TCC AAG CAT AAC TCA GTG ACG CAT GTG TTT GGC AGC GGG ACC CAG CTC ACC GTT TTA A AP000345, IGLL1*02 (1) --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- - BC012293, IGLL1*02 (cDNA) --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- - M34512 , IGLL1*02 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- - M12811 , IGLL1*02 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- - M34514 , IGLL1*03 --- --- --- --T --- --- -A- --- --- --- --- --- --- --- --- --- --- --- --- -
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Accession Allele EXON 3
number name
___________________________________________________________________________________________________________________________________
1.5 1.4 1.3 1.2 1.1 1 2 3 4 5 6 7 8 9 10 11
S Q P K A T P S V T L F P P S S
M27749 , IGLL1*01 (cDNA) (EX3) GT CAG CCC AAG GCC ACC CCC TCG GTC ACT CTG TTC CCG CCG TCC TCT
AP000345, IGLL1*02 (1) -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
BC012293, IGLL1*02 (cDNA) -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
M34513 , IGLL1*02 -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
M12810 , IGLL1*02 -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
M34516 , IGLL1*03 -- --- --- --- --- --- --- --- --- --- --- --- -T- --- --- ---
_____AB_____
15.1 15.3
12 13 14 15 15.2 16 17 18 19 20 21 22 23 24 25 26 27 28
E E L Q A N K A T L V C L M N D F
M27749 , IGLL1*01 (cDNA) (EX3) GAG GAG CTC CAA ... ... ... GCC AAC AAG GCT ACG CTG GTG TGT CTC ATG AAT GAC TTT
AP000345, IGLL1*02 (1) --- --- --- --- ... ... ... --- --- --- --- --A --- --- --- --- --- --- --- ---
BC012293, IGLL1*02 (cDNA) --- --- --- --- ... ... ... --- --- --- --- --A --- --- --- --- --- --- --- ---
M34513 , IGLL1*02 --- --- --- --- ... ... ... --- --- --- --- --A --- --- --- --- --- --- --- ---
M12810 , IGLL1*02 --- --- --- --- ... ... ... --- --- --- --- --A --- --- --- --- --- --- --- ---
M34516 , IGLL1*03 --- --- --- --- ... ... ... --- --- --- --C --A --- --- --- --- --- --- --- --C
_______________BC_______________ _________CD_________
45.1 45.3 45.5
29 30 31 32 33 34 35 36 39 40 41 42 43 44 45 45.2 45.4
Y P G I L T V T W K A D G T P I T Q
M27749 , IGLL1*01 (cDNA) (EX3) TAT CCG ... ... GGA ATC TTG ACG GTG ACC TGG AAG GCA GAT GGT ACC CCC ATC ACC CAG
AP000345, IGLL1*02 (1) --- --- ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
BC012293, IGLL1*02 (cDNA) --- --- ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
M34513 , IGLL1*02 --- --- ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
M12810 , IGLL1*02 --- --- ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
M34516 , IGLL1*03 --- -T- ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
________ ___________________DE___________________
45.7 84.1 84.3 84.5 84.7 85.6
45.6 77 78 79 80 81 82 83 84 84.2 84.4 84.6 85.7 85.5
G V E M T T P S K Q S N
M27749 , IGLL1*01 (cDNA) (EX3) ... ... GGC GTG GAG ATG ACC ACG CCC TCC AAA CAG AGC AAC ... ... ... ... ... ...
AP000345, IGLL1*02 (1) ... ... --- --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ...
BC012293, IGLL1*02 (cDNA) ... ... --- --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ...
M34513 , IGLL1*02 ... ... --- --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ...
M12810 , IGLL1*02 ... ... --- --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ...
M34516 , IGLL1*03 ... ... --- --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ...
________________ ___EF___
85.4 85.2 96.1
85.3 85.1 85 86 87 88 89 90 91 92 93 94 95 96 96.2 97 98
N K Y A A S S Y L S L T P E Q W R S
M27749 , IGLL1*01 (cDNA) (EX3) AAC AAG TAC GCG GCC AGC AGC TAC CTG AGC CTG ACG CCC GAG CAG TGG ... ... AGG TCC
AP000345, IGLL1*02 (1) --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ... ... --- ---
BC012293, IGLL1*02 (cDNA) --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ... ... --- ---
M34513 , IGLL1*02 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ... ... --- ---
M12810 , IGLL1*02 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ... ... --- ---
M34516 , IGLL1*03 -G- --- --- AT- --- --- --- --- --- --- --- --- --- --- --- --- ... ... --- ---
_________________________FG_________________________
99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118
R R S Y S C Q V M H E G S T V E
M27749 , IGLL1*01 (cDNA) (EX3) CGC AGA AGC TAC AGC TGC CAG GTC ATG CAC GAA ... ... ... ... GGG AGC ACC GTG GAG
AP000345, IGLL1*02 (1) --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... --- --- --- --- ---
BC012293, IGLL1*02 (cDNA) --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... --- --- --- --- ---
M34513 , IGLL1*02 --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... --- --- --- --- ---
M12810 , IGLL1*02 --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... --- --- --- --- ---
M34516 , IGLL1*03 --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... --- --- --T -CA ---
119 120 121 122 123 124 125 126 127 128
K T V A P A E C S *
M27749 , IGLL1*01 (cDNA) (EX3) AAG ACG GTG GCC CCT GCA GAA TGT TCA
AP000345, IGLL1*02 (1) --- --- --- --- --- --- --- --- ---
BC012293, IGLL1*02 (cDNA) --- --- --- --- --- --- --- --- ---
M34513 , IGLL1*02 --- --- --- --- --- --- --- --- ---
M12810 , IGLL1*02 --- --- --- --- --- --- --- --- ---
M34516 , IGLL1*03 --- --- --- --- --- --- --- --- ---
Legend:
- When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters.
- Dashes indicate identical nucleotides. Dots indicate gaps by comparison to the longest sequence.
- Blanks indicate partial sequences (blanks at the 5' and/or 3' end).
- Exon names are shown between parentheses on the first line.
- Cysteine involved in the disulfide bridge are shown in purple.
- STOP-CODON is indicated by an asterisk.
| (1) | The sequence from AP000345 (IGLL1*02) is in complementary inverted orientation in the flat file. Note that IGLL1*02 only differs from IGLL1*01 by a single nucleotide difference in EX3 at position 60 (according to the IMGT numbering for C-DOMAIN and C-LIKE-DOMAIN). |
| (2) | The splicing type between EX1 and EX2 is codon_start 2, instead of the usual splicing type (codon_start 3) for IG and TR. |
See also:
- IMGT Repertoire:
- IMGT Scientific chart:
- IMGT Index:
- IMGT Education (FR):
- Tools:
Created: 28/02/2003
Last updated: Friday, 22-Sep-2023 18:32:05 CEST
Author: Dominique Scaviner
Editor: Elodie Gemrot
Last updated: Friday, 22-Sep-2023 18:32:05 CEST
Author: Dominique Scaviner
Editor: Elodie Gemrot
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