IMGT Repertoire (RPI)
Alignment of alleles: Human IGLL3
___________________________________________________________________________________________________________________________________
Accession Allele EXON 1
number name
___________________________________________________________________________________________________________________________________
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20
M G H G E T D A R V R G K G S L R P Q G
AL022324, IGLL3*01 (EX1) ATG GGC CAT GGA GAA ACA GAT GCC AGG GTA AGA GGA AAG GGG AGT CTC AGA CCC CAG GGG
21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40
K R V T G K R G Q S H V I S S R D T R Y
AL022324, IGLL3*01 (EX1) AAA AGA GTC ACT GGA AAG AGG GGC CAG TCC CAT GTC ATA TCC AGC AGA GAC ACC AGG TAC
41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60
S R R T L D M T M R R A L L A M T W E R
AL022324, IGLL3*01 (EX1) AGC AGA AGG ACC TTG GAC ATG ACC ATG AGG AGG GCC TTG TTG GCC ATG ACC TGG GAG AGA
61
W
AL022324, IGLL3*01 (EX1) (2) TGG GG
___________________________________________________________________________________________________________________________________
Accession Allele EXON 2
number name
___________________________________________________________________________________________________________________________________ 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20
G F L L Q R G S W T G P G C W P R G F Q
AL022324, IGLL3*01 (EX2) G TTC CTG CTC CAG CGC GGC TCC TGG ACT GGC CCC GGG TGC TGG CCC CGG GGG TTT CAA
M12989 , IGLL3*01 --- --- ---
20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38
S K H N S V K H V F G S G T Q L T V L
AL022324, IGLL3*01 (EX2) TCC AAG CAT AAT TCA GTG AAG CAT GTG TTT GGC AGC GGG ACC CAG CTC ACC GTT TTA G
M12989 , IGLL3*01 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- -
___________________________________________________________________________________________________________________________________
Accession Allele EXON 3
number name
___________________________________________________________________________________________________________________________________ 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20
G Q P K A T P S V T L F L P S S
AL022324, IGLL3*01 (EX3) GT CAG CCC AAG GCC ACC CCC TCG GTC ACT CTG TTC CTG CCG TCC TCT
S
M12988 , IGLL3*01 (1) -- --- --- --- --- --- --- --- --- --- --- --- TC- --- --- ---
_____AB_____ ________
15.1 15.3
12 13 14 15 15.2 16 17 18 19 20 21 22 23 24 25 26 27 28
E E L Q A N K A T L V C L M N D F
AL022324, IGLL3*01 (EX3) GAG GAG CTC CAA ... ... ... GCC AAC AAG GCC ACA CTG GTG TGT CTC ATG AAT GAC TTC
M12988 , IGLL3*01 (1) --- --- --- --- ... ... ... --- --- --- --- --- --- --- --- --- --- --- --- ---
_______________BC_______________ _________CD_________
45.1 45.3 45.5
29 30 31 32 33 34 35 36 39 40 41 42 43 44 45 45.2 45.4
Y L G I L T V T W K A D G T P I T Q
AL022324, IGLL3*01 (EX3) TAT CTG ... ... GGA ATC TTG ACG GTG ACC TGG AAG GCA GAT GGT ACC CCC ATC ACC CAG
M12988 , IGLL3*01 (1) --- --- ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
________ ___________________DE___________________
45.7 84.1 84.3 84.5 84.7 85.6
45.6 77 78 79 80 81 82 83 84 84.2 84.4 84.6 85.7 85.5
G V E M T T P S K Q S N
AL022324, IGLL3*01 (EX3) ... ... GGC GTG GAG ATG ACC ACG CCC TCC AAA CAG AGC AAC ... ... ... ... ... ...
A
M12988 , IGLL3*01 (1) ... ... -CG --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... ... ...
________________ ___EF___
85.4 85.2 96.1
85.3 85.1 85 86 87 88 89 90 91 92 93 94 95 96 96.2 97 98
S K Y M A S S Y L S L T P E Q W R S
AL022324, IGLL3*01 (EX3) AGC AAG TAC ATG GCC AGC AGC TAC CTG AGC CTG ACG CCC GAG CAG TGG ... ... AGG TCC
M12988 , IGLL3*01 (1) --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ... ... --- ---
_________________________FG_________________________
99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118
R R S Y S C Q V M H E G S T A E
AL022324, IGLL3*01 (EX3) CGC AGA AGC TAC AGC TGC CAG GTC ATG CAT GAA ... ... ... ... GGG AGC ACT GCA GAG
M12988 , IGLL3*01 (1) --- --- --- --- --- --- --- --- --- --- --- ... ... ... ... --- --- --- --- ---
119 120 121 122 123 124 125 126 127 128
K T V A P A E C S *
AL022324, IGLL3*01 (EX3) AAG ACG GTG GCC CCT GCA GAA TGT TCA
M12988 , IGLL3*01 (1) --- --- --- --- --- --- --- --- ---
Legend:
- When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters.
- Dashes indicate identical nucleotides. Dots indicate gaps by comparison to the longest sequence.
- Blanks indicate partial sequences (blanks at the 5' and/or 3' end).
- Exon names are shown between parentheses on the first line.
- Cysteine involved in the disulfide bridge are shown in purple.
- STOP-CODON is indicated by an asterisk.
| (1) | The two nucleotide inversions in EX3 shown in italics and in black, are probably typing or sequencing errors. |
| (2) | The splicing type between EX1 and EX2 is codon_start 2, instead of the usual splicing type (codon_start 3) for IG and TR. |
See also:
- IMGT Repertoire:
- IMGT Scientific chart:
- IMGT Index:
- IMGT Education (FR):
- Tools:
Created: 28/02/2003
Last updated: Friday, 22-Sep-2023 18:32:05 CEST
Author: Dominique Scaviner
Editor: Elodie Gemrot
Last updated: Friday, 22-Sep-2023 18:32:05 CEST
Author: Dominique Scaviner
Editor: Elodie Gemrot
IMGT Home page |
IMGT Repertoire (IG and TR) |
IMGT Repertoire (MH) |
IMGT Repertoire (RPI) |
IMGT Index |
IMGT Scientific chart |
IMGT Education |
IMGT Latest news 
© Copyright 1995-2024 IMGT®, the international ImMunoGeneTics information system® | Terms of use | About us | Contact us | Citing IMGT