IMGT Repertoire (IG and TR)

Rabbit (Oryctolagus cuniculus) TRA/TRD locus on chromosome 17

The orientation of the rabbit (Oryctolagus cuniculus) TRA/TRD locus on the chromosome 17 is forward (FWD).

Locus representation rabbit TRA/TRD

Legend:
Colors are according to IMGT color menu for genes.
The boxes representing the genes are not to scale. Exons are not shown.
A double slash // indicates a gap in genome assembly. Distances in bp (base pair) or in kb (kilobase) associated with a double slash are taken into account in the length of the lines and included in the numbers displayed at the right end of the lines.
A dotted line ... indicates the distance in kb (kilobase) between the locus and its bornes (5' borne and the most 5' gene in the locus and/or 3' borne and the most 3' gene in the locus) on the top and bottom lines, respectively. These distances are not represented at scale and/or are not included in IMGT-LOCUS-UNIT and may not be included in the numbers displayed at the right ends of these two lines .

TRA and TRD gene names are according to the IMGT nomenclature [1].
Single arrows show genes whose polarity is opposite to that of the D-J-C-CLUSTER comprising TRDD (D1 to D2)-TRDJ (J1 to J3)-TRDC and that of the J-C-CLUSTER comprising TRAJ (J1 to J61)-TRAC.

Zoom for TRA J-C-CLUSTER

zoom

IMGT references:

[1] Lefranc M-P. Front Immunol. 2014 Feb 05;5:22. doi: 10.3389/fimmu.2014.00022. Open access.. PMID:24600447

More information:

See also:

Created:: 20/11/2018
Last updated:: 22/09/2023
Authors:: Perrine Pégorier