Zebrafish (Danio rerio) TRA/TRD locus on chromosome 2

The orientation of the zebrafish (Danio rerio) TRA/TRD locus on the chromosome 2 is forward (FWD).

Legend:
Colors are according to IMGT color menu for genes.
The boxes representing the genes are not to scale. Exons are not shown.
A double slash // indicates a gap in genome assembly. Distances in bp (base pair) or in kb (kilobase) associated with a double slash are taken into account in the length of the lines and included in the numbers displayed at the right end of the lines.
A dotted line ... indicates the distance in kb (kilobase) between the locus and its bornes (5' borne and the most 5' gene in the locus and/or 3' borne and the most 3' gene in the locus) on the top and bottom lines, respectively. These distances are not represented at scale and/or are not included in IMGT-LOCUS-UNIT and may not be included in the numbers displayed at the right ends of these two lines .

TRA and TRD gene names are according to the IMGT nomenclature [2].
Single arrows show genes whose polarity is opposite to that of the D-J-C-CLUSTER comprising IGHD (D1 to D6)- TRDJ (DJ1 to DJ2)- TRDC- TRAJ (J1 to J111)- TRAC

Zoom for TRD D-J-C-CLUSTER

Zoom for TRA J-C-CLUSTER

• Gene table: zebrafish (Danio rerio) TRAV
• Gene table: zebrafish (Danio rerio) TRAJ
• Gene table: zebrafish (Danio rerio) TRAC
• Gene table: zebrafish (Danio rerio) TRDD
• Gene table: zebrafish (Danio rerio) TRDJ
• Gene table: zebrafish (Danio rerio) TRDC
• Potential germline repertoire: zebrafish (Danio rerio) TRAV and TRAJ genes on chromosome 2
• Potential germline repertoire: Zebrafish (Danio rerio) TRDD and TRDJ genes on chromosome 2

• Genomic orientation (IMGT Index)
• Taxonomy: Euteleostei