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Naked mole-rat (Heterocephalus glaber) TRG locus

IMGT gene name Functionality IMGT gene order
IMGT locus ID:Hetgla_TRG_3
Genome assembly: Naked mole-rat maternal		 IMGT gene order
IMGT locus ID: Hetgla_TRG_4
Genome assembly: Naked mole-rat paternal		 IMGT gene orientation in locus Copy Number Variation (CNV)
TRGV1-1 F 1 1 direct
TRGV3-1 ORF 2 2 direct
TRGVA P 3 3 direct
TRGV4-1 P 4 4 direct
TRGVB P 5 5 direct
TRGVC P 6 6 direct
TRGJ1-1 ORF 7 7 direct
TRGJ1-2 F 8 8 direct
TRGC1 P 9 9 direct
TRGV1-2 P 10 10 direct
TRGV2 P 11 11 direct
TRGV3-2 ORF 12 12 direct
TRGJ2-1 P 13 13 direct
TRGC2 F 14 14 direct
TRGV1-3 P 15 15 direct
TRGV1-4 P 16 16 direct
TRGJ3-1 ORF 17 17 direct
TRGJ3-2 P 18 18 direct
TRGJ3-3 ORF 19 19 direct
TRGC3 F 20 20 direct
TRGV1-5 P 21 21 direct
TRGJ4-1 ORF 22 22 direct
TRGJ4-2 ORF 23 23 direct
TRGC4 P 24 24 direct
TRGV4-2 ORF 25 25 direct
TRGV4-3 ORF 26 26 direct
TRGVD P 27 27 direct
TRGJ5-1 P 28 28 direct
TRGJ5-2 P 29 29 direct
TRGJ5-3 F ORF 30 30 direct
TRGC5 F 31 31 direct
IMGT notes:
  1. (1) TRGC2S1 is not present here, as they are only found in the scaffold assembly (IMGT000072).
Created:
04/10/2021
Last updated:
24/01/2024
Authors:
Ariadni Papadaki, Maria Georga, Alexandre Albani