IMGT Repertoire (IG and TR)
Locus in genome assembly: domestic ferret (Mustela putorius furo) TRB locus
Domestic ferret (Mustela putorius furo) TRB locus
| IMGT locus | TRB locus | TRB locus |
|---|---|---|
| IMGT locus ID: Musputfur_TRB_1 | IMGT locus ID: Musputfur_TRB_2 | |
| Taxonomy | Mustela putorius furo (domestic ferret), taxon:9669, breed: Sable | Mustela putorius furo (domestic ferret), taxon:9669, isolate: JIRA1106 |
| Genome assembly | MusPutFur1.0 | ASM1176430v1.1 |
| GenBank assembly ID | GCA_000215625.1 | GCA_011764305.2 |
| RefSeq assembly ID | GCF_000215625.1 | GCF_011764305.1 |
| BAC library | ||
| Chromosome | ||
| Chromosome sequence ID and locus positions (GenBank assembly) | NW_004569148.1 (27352-47999 complement) and NW_004569535.1 (338736-577264 complement) | NW_025421998.1 (94643506-94983309) |
| Chromosome sequence ID and locus positions (RefSeq assembly) | ||
| IMGT locus orientation on the chromosome | ||
| IMGT/LIGM-DB locus reference sequence (ID) | IMGT000022 and IMGT000023 | IMGT000203 |
| IMGT/LIGM-DB locus reference sequence length (bp) | 20648 and 238529 | 339804 |
More information:
- Gene table: domestic ferret (Mustela putorius furo) TRBV
- Gene table: domestic ferret (Mustela putorius furo) TRBD
- Gene table: domestic ferret (Mustela putorius furo) TRBJ
- Gene table: domestic ferret (Mustela putorius furo) TRBC
- Potential germline repertoire: domestic ferret (Mustela putorius furo) TRBV, TRBD and TRBJ genes
See also:
- Created:
- 21/09/2018
- Last updated:
- 18/04/2024
- Authors:
- Perrine Pégorier, Ifigeneia Sideri
