House mouse ( Mus musculus) IGH locus on chromosome 12
Strain C57BL/6
- The house mouse ( Mus musculus) C57BL/6 IGH locus is on chromosome 12.
The orientation of the locus is reverse (REV).
- The house mouse ( Mus musculus) C57BL/6 IGH locus spans 2772 kilobases (kb),
from 10 kb upstream of the most 5' gene in the locus, IGHV1-86 (P), to 10 kb
downstream of the most 3' gene in the locus, IGHA (F).
The Locus representation
encompasses 2800 kb.
- The house mouse ( Mus musculus) C57BL/6 IGH locus consists
of 238 genes: 203 IGHV genes belonging to 16 IGHV subgroups, 24 IGHD genes belonging to 6 sets, 4 IGHJ genes belonging to 4 sets
and 8 IGHC gene.
- The IGHV genes span 2470 kilobases (kb),
the IGHD genes span 121 kilobases (kb),
the IGHJ genes span 5 kilobases (kb) and
the IGHC genes span 176 kilobases (kb).
Strain BALB/cJ
- The house mouse ( Mus musculus) BALB/cJ IGH locus is on chromosome 12.
The orientation of the locus is reverse (REV).
- The house mouse ( Mus musculus) BALB/cJ IGH locus spans 4095 kilobases (kb),
from 10 kb upstream of the most 5' gene in the locus, IGHV1-86 (F), to 10 kb
downstream of the most 3' gene in the locus, IGHA (F).
- The house mouse ( Mus musculus) BALB/cJ IGH locus consists
of 353 genes: 309 IGHV genes belonging to 15 IGHV subgroups, 32 IGHD genes belonging to 6 sets, 4 IGHJ genes belonging to 4 sets
and 8 IGHC gene.
- The IGHV genes span 3772 kilobases (kb),
the IGHD genes span 134 kilobases (kb),
the IGHJ genes span 5 kilobases (kb) and
the IGHC genes span 182 kilobases (kb).
Strain DBA/2J
- The house mouse ( Mus musculus) DBA/2J IGH locus is on chromosome 12.
The orientation of the locus is reverse (REV).
- The house mouse ( Mus musculus) DBA/2J IGH locus spans 3469 kilobases (kb),
from 10 kb upstream of the most 5' gene in the locus, IGHV1-86 (P), to 10 kb
downstream of the most 3' gene in the locus, IGHA (F).
- The house mouse ( Mus musculus) DBA/2J IGH locus consists
of 298 genes: 257 IGHV genes belonging to 15 IGHV subgroups, 29 IGHD genes belonging to 6 sets, 4 IGHJ genes belonging to 4 sets
and 8 IGHC gene.
- The IGHV genes span 3157 kilobases (kb),
the IGHD genes span 126 kilobases (kb),
the IGHJ genes span 5 kilobases (kb) and
the IGHC genes span 180 kilobases (kb).
Strain NOD/SCID
- The house mouse ( Mus musculus) NOD/SCID IGH locus is on chromosome 12.
The orientation of the locus is forward (FWD).
- The house mouse ( Mus musculus) NOD/SCID IGH locus spans 2776 kilobases (kb),
from 10 kb upstream of the most 5' gene in the locus, IGHV1-86 (P), to 10 kb
downstream of the most 3' gene in the locus, IGHA (F).
- The house mouse ( Mus musculus) NOD/SCID IGH locus consists
of 241 genes: 203 IGHV genes belonging to 16 IGHV subgroups, 26 IGHD genes belonging to 6 sets, 4 IGHJ genes belonging to 4 sets
and 8 IGHC gene.
- The IGHV genes span 2471 kilobases (kb),
the IGHD genes span 120 kilobases (kb),
the IGHJ genes span 2 kilobases (kb) and
the IGHC genes span 183 kilobases (kb).
- Created:
- 23/11/2020
- Last updated:
- Thursday, 21-Nov-2024 21:00:07 CET
- Author:
- Anna Tran
- Editor:
- Ifigeneia Sideri
