IMGT Repertoire (IG and TR)

Locus description: Naked mole-rat (Heterocephalus glaber) TRA

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• Locus gene order: Naked mole-rat (Heterocephalus glaber) TRA/TRD
• Locus in genome assembly: Naked mole-rat (Heterocephalus glaber) TRA/TRD
• Locus representation: Naked mole-rat (Heterocephalus glaber) TRA/TRD

Naked mole-rat (Heterocephalus glaber) TRA locus

• The Naked mole-rat (Heterocephalus glaber) TRA locus. The orientation of the locus is reverse (REV).
• The Naked mole-rat (Heterocephalus glaber) TRA/TRD locus spans 1900 kilobases (kb), from 10 kb upstream of the most 5' gene in the locus, TRAV1 (F), to 10 kb downstream of the most 3' gene in the locus, TRAC (F). The Locus representation encompasses 1600 kb including the 5' borne OR10G3 and the 3' borne DAD1.
• The Naked mole-rat (Heterocephalus glaber) TRA locus consists of 93 TRAV genes belonging to 39 TRAV subgroups, 59 TRAJ segments and 1 TRAC gene.
• The TRAV genes span 1410 kilobases (kb), the TRAJ genes span 73 kilobases (kb), the TRAC genes span 11 kilobases (kb)

Bornes of the Naked mole-rat (Heterocephalus glaber) TRA locus

• OR10G3 (5' borne) has been identified 942 bp upstream of TRAV1, the most 5' gene in the locus.
• DAD1 (3' borne) has been identified 19 kb downstream of TRAC, the most 3' gene in the locus.

Created:

22/07/2021

Last updated:

Thursday, 09-Dec-2021 21:03:53 CET

Author:

Maria Georga

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